RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GRIA3P42263 894 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 LSSP48449 732 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CCNG1P51959 295 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 PKNOX1P55347 436 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 GFERP55789 205 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 PPP1CAP62136 330 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 YBX1P67809 324 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 RELAQ04206 551 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CHIT1Q13231 466 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 LAPTM5Q13571 262 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 TRA2AQ13595 282 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 SPIDRQ14159 915 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 ZNF425Q6IV72 752 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 SLCO4C1Q6ZQN7 724 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 RPS27LQ71UM5 84 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 PRSS42Q7Z5A4 293 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 MILR1Q7Z6M3 343 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 L3MBTL4Q8NA19 623 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 TRPC4APQ8TEL6 797 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 ZNF75CPQ92670 426 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 WDR34Q96EX3 536 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 MAGEB10Q96LZ2 347 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 MAGEB18Q96M61 343 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 NSUN5Q96P11 429 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 NUDT22Q9BRQ3 303 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 RTKNQ9BST9 563 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 DPH7Q9BTV6 452 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CHRNA10Q9GZZ6 450 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 NT5DC2Q9H857 520 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 EML4Q9HC35 981 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 SEMA4BQ9NPR2 832 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CDV3Q9UKY7 258 aaKnown RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 FAM186AA6NE01 2351 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 IGKV1-8A0A0C4DH67 115 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 E7EQ34 232 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 H7BY64 318 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PPP6CO00743 305 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CASC3O15234 703 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PRAMEF4O60810 478 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CLDN9O95484 217 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CDH1P12830 882 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 MDH1P40925 334 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 HNF4AP41235 474 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SLC1A6P48664 564 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CCR8P51685 355 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 IRF8Q02556 426 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ZFP36L1Q07352 338 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 LCP2Q13094 533 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 RCN2Q14257 317 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 RBBP7Q16576 425 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CATSPEREQ5SY80 951 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CACHD1Q5VU97 1274 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PRAMEF9Q5VWM5 478 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 FCRL6Q6DN72 434 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ZCCHC23Q6ZST2 131 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 TMPRSS9Q7Z410 1059 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ARHGAP22Q7Z5H3 698 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SLCO6A1Q86UG4 719 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 FAM129CQ86XR2 697 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 KMT5CQ86Y97 462 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 FAM20CQ8IXL6 584 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CACTIN-AS1Q8N1I8 211 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 KLHL6Q8WZ60 621 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 EFCAB11Q9BUY7 163 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SARGQ9BW04 601 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SLC6A20Q9NP91 592 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 ACSS2Q9NR19 701 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 THAP1Q9NVV9 213 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 CUEDC1Q9NWM3 386 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 TMEM9Q9P0T7 183 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
LINC00339-213ENST00000642137 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 SNRNP200O75643 2136 aaKnown RBP11.84□□□□□ -0.51
LINC00339-213ENST00000642137 IGHV5-51A0A0C4DH38 117 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 IGHV5-10-1A0A0J9YXX1 117 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 OR2A25A4D2G3 310 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 SLC9B1P1A6NJY1 282 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 D6RAR5 112 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 TMX2-CTNND1H3BSU7 103 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 GIPC1O14908 333 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 MAP3K7O43318 606 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 ITM2AO43736 263 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 KIF1CO43896 1103 aaKnown RBP11.83□□□□□ -0.52
LINC00339-213ENST00000642137 ZBTB11O95625 1053 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-213ENST00000642137 ESRRBO95718 433 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 FGF4P08620 206 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 ANKRD34CP0C6C1 535 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 THRAP10827 490 aa11.83□□□□□ -0.52
LINC00339-213ENST00000642137 JUPP14923 745 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms