RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LOC105369274A0A096LPK9 316 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 LOC102723532A0A0G2JNH3 316 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 FAM95CA0A1B0GW59 222 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 GSTA2P09210 222 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 HIST1H2AGP0C0S8 130 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 HIST1H2ADP20671 130 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 SAT1P21673 171 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 PMS2P54278 862 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 ILF2Q12905 390 aaKnown RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 TRADDQ15628 312 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 PHKG1Q16816 387 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 FAM214AQ32MH5 1076 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 ZNF425Q6IV72 752 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 C8orf74Q6P047 294 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 FBXO42Q6P3S6 717 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 APLFQ8IW19 511 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 OR4N4Q8N0Y3 316 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 C9orf43Q8TAL5 461 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 ZNF592Q92610 1267 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 PDLIM5Q96HC4 596 aaKnown RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 HIST1H2AHQ96KK5 128 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 HIST1H2AJQ99878 128 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 H2AFJQ9BTM1 129 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 PCBD2Q9H0N5 130 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 RHOJQ9H4E5 214 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 CCDC177Q9NQR7 707 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-231ENST00000641939 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 NUP210LQ5VU65 1888 aa14.38□□□□□ -0.11
PHGDH-231ENST00000641939 TNRC6AQ8NDV7 1962 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 HYKKA2RU49 373 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 PABPN1LA6NDY0 278 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 H0YGG7 62 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 MKRN2OSH3BPM6 223 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 RFPL1O75677 317 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 EIF2S1P05198 315 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 PIM1P11309 404 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 EZRP15311 586 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 AP1S2P56377 157 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 ARF3P61204 181 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 TBPL1P62380 186 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 SLC7A5Q01650 507 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 RELAQ04206 551 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 SLC9A5Q14940 896 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 PRAMEF13Q5VWM6 474 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 MRPL14Q6P1L8 145 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 AGTRAPQ6RW13 159 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 MBOAT1Q6ZNC8 495 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 C3orf62Q6ZUJ4 267 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 CYS1Q717R9 158 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 CCDC25Q86WR0 208 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 CDKL2Q92772 493 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 ABHD17AQ96GS6 310 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 VPS39Q96JC1 886 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 MCMBPQ9BTE3 642 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 TRIM54Q9BYV2 358 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 SLC22A11Q9NSA0 550 aa14.37□□□□□ -0.11
PHGDH-231ENST00000641939 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 PTRH2Q9Y3E5 179 aaKnown RBP14.37□□□□□ -0.11
PHGDH-231ENST00000641939 NBASA2RRP1 2371 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TCRBV9S1A1TA0A576 114 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 CXorf49A8MYA2 514 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 H7BY64 318 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 PIAS1O75925 651 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ONECUT2O95948 504 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TUBB4AP04350 444 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ENO2P09104 434 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ZNF37AP17032 561 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ITGAXP20702 1163 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 CCND1P24385 295 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 HRH2P25021 359 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 FOLR3P41439 243 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 MAGEA4P43358 317 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TAS2R39P59534 338 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 GPX6P59796 221 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 NAE1Q13564 534 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 SSPNQ14714 243 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TMEM207Q6UWW9 146 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ADCK2Q7Z695 626 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 RAB43Q86YS6 212 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 NKAPQ8N5F7 415 aaKnown RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 OR2Y1Q8NGV0 311 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 RERGQ96A58 199 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 FKBP10Q96AY3 582 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 PRAP1Q96NZ9 151 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 LRRC1Q9BTT6 524 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ATG10Q9H0Y0 220 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ZNF71Q9NQZ8 489 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 ARL15Q9NXU5 204 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TXNDC16Q9P2K2 825 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 TLK1Q9UKI8 766 aa14.36□□□□□ -0.11
PHGDH-231ENST00000641939 HEMK1Q9Y5R4 338 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-231ENST00000641939 DOCK10Q96BY6 2186 aa14.35□□□□□ -0.11
PHGDH-231ENST00000641939 ESYT3A0FGR9 886 aa14.35□□□□□ -0.11
PHGDH-231ENST00000641939 ARGFXA6NJG6 315 aa14.35□□□□□ -0.11
PHGDH-231ENST00000641939 FAM159BA6NKW6 160 aa14.35□□□□□ -0.11
PHGDH-231ENST00000641939 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-231ENST00000641939 HAT1O14929 419 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms