RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZDHHC2Q9UIJ5 367 aa16.84■□□□□ 0.29
PHGDH-230ENST00000641927 H7BY64 318 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 B4GAT1O43505 415 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 EDF1O60869 148 aaKnown RBP16.83■□□□□ 0.28
PHGDH-230ENST00000641927 EBLN1P0CF75 366 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 VARSP26640 1264 aaKnown RBP16.83■□□□□ 0.28
PHGDH-230ENST00000641927 GPLD1P80108 840 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 ABATP80404 500 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 DOC2AQ14183 400 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 NR1D2Q14995 579 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 KIAA1614Q5VZ46 1190 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 CLEC6AQ6EIG7 209 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 NXPE4Q6UWF7 544 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 SLCO4C1Q6ZQN7 724 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 USP53Q70EK8 1073 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 PRAP1Q96NZ9 151 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 TGM7Q96PF1 710 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 FAM107BQ9H098 131 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 EPB41L1Q9H4G0 881 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 PNPOQ9NVS9 261 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 KLHL20Q9Y2M5 609 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 PCM1Q15154 2024 aa16.83■□□□□ 0.28
PHGDH-230ENST00000641927 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 FFAR3O14843 346 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 CAPN5O15484 640 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 GPR42O15529 346 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 C1GALT1C1LP0DN25 315 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 HGFP14210 728 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 CKMT2P17540 419 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 CCR8P51685 355 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 CBX1P83916 185 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 MEF2AQ02078 507 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 CPSF6Q16630 551 aaKnown RBP eCLIP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 STPG1Q5TH74 334 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 FAM219BQ5XKK7 198 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 FAM92BQ6ZTR7 304 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 FLVCR1-AS1Q8TAF5 88 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 METTL6Q8TCB7 284 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 ZNF317Q96PQ6 595 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 DPH7Q9BTV6 452 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 KLHL25Q9H0H3 589 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 RABEP2Q9H5N1 569 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 KLHL3Q9UH77 587 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 ZNF225Q9UK10 706 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 POMT2Q9UKY4 750 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-230ENST00000641927 TRAF6Q9Y4K3 522 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 TIMM22Q9Y584 194 aa16.82■□□□□ 0.28
PHGDH-230ENST00000641927 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 AZIN1O14977 448 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PRAMEF4O60810 478 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 RPLP0P05388 317 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CAPN1P07384 714 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CDH3P22223 829 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CD1CP29017 333 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 HMOX2P30519 316 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 FOXA1P55317 472 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 GFERP55789 205 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 SLC5A12Q1EHB4 618 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PRAMEF9Q5VWM5 478 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 LIPJQ5W064 366 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 AFAP1L2Q8N4X5 818 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PIWIL2Q8TC59 973 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 GRAMD1AQ96CP6 724 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PTCD3Q96EY7 689 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 THOC1Q96FV9 657 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 ZDHHC12Q96GR4 267 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PRR11Q96HE9 360 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PPM1MQ96MI6 270 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 SLC6A20Q9NP91 592 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 TRPS1Q9UHF7 1281 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 RAPGEFL1Q9UHV5 662 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 A0A0J9YY10 115 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 HGSO14964 777 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CASC3O15234 703 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 UGDHO60701 494 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 WFS1O76024 890 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 ENO1P06733 434 aaKnown RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PVRP15151 417 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CD22P20273 847 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 MAGP20916 626 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 SERPINB3P29508 390 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 SF3A3Q12874 501 aaKnown RBP eCLIP16.81■□□□□ 0.281e-9■■■■□ 22.2
PHGDH-230ENST00000641927 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 CLYBLQ8N0X4 340 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 ABHD11Q8NFV4 315 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 MAGEB10Q96LZ2 347 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-230ENST00000641927 AIF1LQ9BQI0 150 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 EFCAB11Q9BUY7 163 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 TWSG1Q9GZX9 223 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 EHD1Q9H4M9 534 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 PELI2Q9HAT8 420 aa16.81■□□□□ 0.28
PHGDH-230ENST00000641927 SNX7Q9UNH6 387 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms