RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ALAS2P22557 587 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 AP1S2P56377 157 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 VSX2P58304 361 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-207ENST00000639857 MUM1Q2TAK8 710 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 HECTD2Q5U5R9 776 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 PRMT9Q6P2P2 845 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 SYT10Q6XYQ8 523 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 PTERQ96BW5 349 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 MVB12AQ96EY5 273 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 LINGO1Q96FE5 620 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 TRIM55Q9BYV6 548 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 RAB17Q9H0T7 212 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 CCDC177Q9NQR7 707 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-207ENST00000639857 STOX2Q9P2F5 926 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-207ENST00000639857 G3BP2Q9UN86 482 aaKnown RBP16.93■□□□□ 0.3
PTPN11-207ENST00000639857 PDE10AQ9Y233 779 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 TP53TG5Q9Y2B4 290 aa16.93■□□□□ 0.3
PTPN11-207ENST00000639857 PTRH2Q9Y3E5 179 aaKnown RBP16.93■□□□□ 0.3
PTPN11-207ENST00000639857 IGKV1-8A0A0C4DH67 115 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HYKKA2RU49 373 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ARGFXA6NJG6 315 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 RAD51CO43502 376 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 TSPAN12O95859 305 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ENO2P09104 434 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HIST1H2AGP0C0S8 130 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HIST1H2ADP20671 130 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ITGAXP20702 1163 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 CAV1Q03135 178 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 KLRB1Q12918 225 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 TSTA3Q13630 321 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 FASTKD3Q14CZ7 662 aaKnown RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 CPZQ66K79 652 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 DUPD1Q68J44 220 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 FRMPD2BQ6IN97 320 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 FBXO42Q6P3S6 717 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 OVCH1Q7RTY7 1134 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 MRGPREQ86SM8 312 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HPS6Q86YV9 775 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ANKMY2Q8IV38 441 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ZBED8Q8IZ13 594 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 GPATCH11Q8N954 259 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ANKRD7Q92527 254 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 PDLIM5Q96HC4 596 aaKnown RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HIST1H2AHQ96KK5 128 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 FER1L6-AS2Q96M78 137 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 HIST1H2AJQ99878 128 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 H2AFJQ9BTM1 129 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 ZNF71Q9NQZ8 489 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 SLC22A11Q9NSA0 550 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 SLC17A6Q9P2U8 582 aa16.92■□□□□ 0.3
PTPN11-207ENST00000639857 UTP11Q9Y3A2 253 aaKnown RBP16.92■□□□□ 0.3
PTPN11-207ENST00000639857 PCSK5Q92824 1860 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 LOC105369274A0A096LPK9 316 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 LOC102723532A0A0G2JNH3 316 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 PABPN1LA6NDY0 278 aaKnown RBP16.91■□□□□ 0.3
PTPN11-207ENST00000639857 NRP2O60462 931 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 CASRP41180 1078 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 TBPL1P62380 186 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
PTPN11-207ENST00000639857 C2orf54Q08AI8 447 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 THEMIS2Q5TEJ8 643 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 GARNL3Q5VVW2 1013 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 PRAMEF13Q5VWM6 474 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 ASB18Q6ZVZ8 466 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 CYS1Q717R9 158 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 ZC3HC1Q86WB0 502 aaKnown RBP16.91■□□□□ 0.3
PTPN11-207ENST00000639857 OR4N4Q8N0Y3 316 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 RERGQ96A58 199 aaPredicted RBP16.91■□□□□ 0.3
PTPN11-207ENST00000639857 OR2A5Q96R48 311 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 SLC25A23Q9BV35 468 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 TRIM54Q9BYV2 358 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 ADAMTS6Q9UKP5 1117 aa16.91■□□□□ 0.3
PTPN11-207ENST00000639857 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
PTPN11-207ENST00000639857 H0YGG7 62 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 PEX12O00623 359 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 PRPF4O43172 522 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 KLHL41O60662 606 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 CNOT3O75175 753 aaKnown RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 DNAJB5O75953 348 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 GSTA2P09210 222 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 ZNF37AP17032 561 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 OTX2P32243 289 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 PGDP52209 483 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 ARF3P61204 181 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 YBX1P67809 324 aaKnown RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 ATP1A4Q13733 1029 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 FAM69BQ5VUD6 431 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 COX15Q7KZN9 410 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 PTRH1Q86Y79 214 aaKnown RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-207ENST00000639857 CSNK1A1LQ8N752 337 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 ATL1Q8WXF7 558 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 CDKL2Q92772 493 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
PTPN11-207ENST00000639857 OLFM1Q99784 485 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms