RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 HALP42357 657 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 PHC1P78364 1004 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CHIT1Q13231 466 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 SLC36A3Q495N2 470 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 PYCR3Q53H96 274 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF765Q7L2R6 523 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ZFAND2BQ8WV99 257 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 RMND5BQ96G75 393 aaPredicted RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 OSBPL6Q9BZF3 934 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 PAIP1Q9H074 479 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 SLC6A17Q9H1V8 727 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CAAP1Q9H8G2 361 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 GULP1Q9UBP9 304 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 IGLON5A6NGN9 336 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ARHGEF33A8MVX0 844 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CLOCKO15516 846 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 UGDHO60701 494 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 RAP2AP10114 183 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ACPPP15309 386 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 NELFEP18615 380 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 SDC1P18827 310 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 MAP4P27816 1152 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CTHP32929 405 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 S100A3P33764 101 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 DPTQ07507 201 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ABRQ12979 859 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 MAP7Q14244 749 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 SYTL3Q4VX76 610 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 FAM98BQ52LJ0 330 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 LRIF1Q5T3J3 769 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 LIPJQ5W064 366 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 NLRP8Q86W28 1048 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 FIG4Q92562 907 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 GLMNQ92990 594 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 TMEM159Q96B96 161 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 TESCQ96BS2 214 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 APIPQ96GX9 242 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 TSSK3Q96PN8 268 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CCM2Q9BSQ5 444 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 HAUS8Q9BT25 410 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 KCNH6Q9H252 994 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 CIDEBQ9UHD4 219 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 MAN2B2Q9Y2E5 1009 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 COMMD3-BMI1R4GMX3 469 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 COL4A2P08572 1712 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 ELOVL7A1L3X0 281 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 GSTA4O15217 222 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 LILRB5O75023 590 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 DEAF1O75398 565 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 EGFP01133 1207 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 GNAO1P09471 354 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF23P17027 643 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 AMD1P17707 334 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 TACR1P25103 407 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 PDHA2P29803 388 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 TNFRSF4P43489 277 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 CHRNB3Q05901 458 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF33BQ06732 778 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 COL19A1Q14993 1142 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 GTDC1Q4AE62 458 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 IER5LQ5T953 404 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 ATG9BQ674R7 924 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 TRAPPC5Q8IUR0 188 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 RAB7BQ96AH8 199 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 UGT2B28Q9BY64 529 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 MKRN2Q9H000 416 aaKnown RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 RBM38Q9H0Z9 239 aaKnown RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 RMND5AQ9H871 391 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 CLK4Q9HAZ1 481 aaKnown RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 CD320Q9NPF0 282 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 SERHLQ9NQF3 203 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 SMPD3Q9NY59 655 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 ATXN10Q9UBB4 475 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 INVSQ9Y283 1065 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 PCDHB14Q9Y5E9 798 aa14.61□□□□□ -0.07
TRIM3-215ENST00000639856 PCYT1BQ9Y5K3 369 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-215ENST00000639856 A0A096LPI6 279 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 SLC5A10A0PJK1 596 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 VILLO15195 856 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PRSS23O95084 383 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PCDH8O95206 1070 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 RPS9P46781 194 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ROR2Q01974 943 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 IRF8Q02556 426 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PON2Q15165 354 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF658BQ4V348 819 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 TMEM196Q5HYL7 178 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CRTC3Q6UUV7 619 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 OR52E4Q8NGH9 312 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 HM13Q8TCT9 377 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 MAGEE2Q8TD90 523 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ATL1Q8WXF7 558 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ITCHQ96J02 903 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 NECTIN4Q96NY8 510 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms