RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PCDHGA6Q9Y5G7 932 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SLC38A8A6NNN8 435 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 A8MX80 341 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PSMD11O00231 422 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SYN3O14994 580 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 MRPS14O60783 128 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RFPL2O75678 378 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SLC19A1P41440 591 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 NR4A2P43354 598 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ZXDCQ2QGD7 858 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 LRIT3Q3SXY7 679 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 FAHD1Q6P587 224 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ELMOD1Q8N336 334 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 WBP2Q969T9 261 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TESCQ96BS2 214 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 MYO19Q96H55 970 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TXNDC15Q96J42 360 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TPD52L3Q96J77 140 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SPATA17Q96L03 361 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 KCNC2Q96PR1 638 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PANX1Q96RD7 426 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ELOVL6Q9H5J4 265 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ANKHQ9HCJ1 492 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ITM2CQ9NQX7 267 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TRMT13Q9NUP7 481 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CAB39Q9Y376 341 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 OR6C75A6NL08 312 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 FPGTO14772 594 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 DSCR3O14972 297 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ANXA5P08758 320 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ITGALP20701 1170 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ACRV1P26436 265 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 UGT2B10P36537 528 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CTSKP43235 329 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 KIR3DL1P43629 444 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ITGA1P56199 1179 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 TUBA1BP68363 451 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF181Q2M3W8 571 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 DESI1Q6ICB0 168 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF621Q6ZSS3 439 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 TUBA1AQ71U36 451 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CBLL1Q75N03 491 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 EIF3MQ7L2H7 374 aaKnown RBP10.59□□□□□ -0.71
SNIP1-204ENST00000638725 SYTL1Q8IYJ3 562 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CLIP4Q8N3C7 705 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 PIH1D2Q8WWB5 315 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 LINC01599Q8WXQ3 324 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 SLC32A1Q9H598 525 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 IL26Q9NPH9 171 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ARL15Q9NXU5 204 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CRLS1Q9UJA2 301 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 PIKFYVEQ9Y2I7 2098 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 KRT87PA6NCN2 255 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 TAF4O00268 1085 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 NUAK1O60285 661 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CLDN7O95471 211 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CPSF4O95639 269 aaKnown RBP10.59□□□□□ -0.71
SNIP1-204ENST00000638725 IGHA2P01877 340 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ASGR1P07306 291 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 COL6A1P12109 1028 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF24P17028 368 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 RPIAP49247 311 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ZXDBP98169 803 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 MTA1Q13330 715 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CHRNA6Q15825 494 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 DUOXA1Q1HG43 343 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 TPRG1LQ5T0D9 272 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ARMC12Q5T9G4 340 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CLECL1Q8IZS7 167 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 CDADC1Q9BWV3 514 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 HOXD1Q9GZZ0 328 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNIP1-204ENST00000638725 ZFYVE1Q9HBF4 777 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 RDH14Q9HBH5 336 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 QPCTLQ9NXS2 382 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 KLHL3Q9UH77 587 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 BRCA2P51587 3418 aa10.59□□□□□ -0.71
SNIP1-204ENST00000638725 KCNE1BA0A087WTH5 132 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 K7ERQ8 282 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 COCHO43405 550 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 STC2O76061 302 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 EPN2O95208 641 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 C9P02748 559 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 NUDT7P0C024 238 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 GKP32189 559 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 NUDT6P53370 316 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 IFITM2Q01629 132 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 GPR17Q13304 367 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 UGT8Q16880 541 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 IQCCQ4KMZ1 466 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 PARP16Q8N5Y8 322 aa10.58□□□□□ -0.72
SNIP1-204ENST00000638725 CDC26Q8NHZ8 85 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms