RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HCN1O60741 890 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SMIM24O75264 130 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CSO75390 466 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PRPF6O94906 941 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PRSS23O95084 383 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ASS1P00966 412 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 VIPP01282 170 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MT-ND2P03891 347 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SERPINA6P08185 405 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SRPRAP08240 638 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 RPS17P08708 135 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 STSP08842 583 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CD3GP09693 182 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OR4E1P0C645 316 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OR52Z1P0C646 297 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FAM90A13PP0C7W8 464 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FAM90A24PP0C7X0 464 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PLA2G4BP0C869 781 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 EBLN1P0CF75 366 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 STAG3L1P0CL83 205 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 G6PDP11413 515 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CEBPBP17676 345 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ACO1P21399 889 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 DGKAP23743 735 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CCNE1P24864 410 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PON1P27169 355 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PSMB6P28072 239 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OXTRP30559 389 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DCTDP32321 178 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GJA4P35212 333 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CPOXP36551 454 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DLSTP36957 453 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FDFT1P37268 417 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FEN1P39748 380 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PNPLA4P41247 253 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CDKN2CP42773 168 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MMP13P45452 471 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PXNP49023 591 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 GMPSP49915 693 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 CCNG1P51959 295 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RAP1GDS1P52306 607 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 JAK3P52333 1124 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 EMP2P54851 167 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 NRG3P56975 720 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RAB4BP61018 213 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CSNK2A1P68400 391 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 SLC6A3Q01959 620 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CDK18Q07002 472 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ACSM1Q08AH1 577 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 IFFO1Q0D2I5 559 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ILF2Q12905 390 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PRKAA1Q13131 559 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DYNC1I2Q13409 638 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PDE7AQ13946 482 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SLC29A2Q14542 456 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 UAP1Q16222 522 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 PCK2Q16822 640 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TPD52L1Q16890 204 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 SGSM1Q2NKQ1 1148 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 IQCCQ4KMZ1 466 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C2CD6Q53TS8 623 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PCID2Q5JVF3 399 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PRAMEF5Q5TYX0 476 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ATF7IP2Q5U623 682 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PRAMEF9Q5VWM5 478 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PRAMEF6Q5VXH4 476 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 KRT39Q6A163 491 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PLAG1Q6DJT9 500 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZNF470Q6ECI4 717 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TMEM71Q6P5X7 295 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SLC27A1Q6PCB7 646 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ZDHHC24Q6UX98 284 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 UNQ6494/PRO21346Q6UXR6 183 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LRRC31Q6UY01 552 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C11orf57Q6ZUT1 292 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 USP30Q70CQ3 517 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MED25Q71SY5 747 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MRGPRGQ86SM5 289 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 LUZP2Q86TE4 346 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 TAC4Q86UU9 113 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SIAH3Q8IW03 269 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MB21D2Q8IYB1 491 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ADGRF4Q8IZF3 695 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MCOLN2Q8IZK6 566 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GUF1Q8N442 669 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 RNF148Q8N7C7 305 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DNAJC5GQ8N7S2 189 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SCAIQ8N9R8 606 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 MCUQ8NE86 351 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CSNK2A3Q8NEV1 391 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GPRC5AQ8NFJ5 357 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 NUDT10Q8NFP7 164 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CADM4Q8NFZ8 388 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OR8K1Q8NGG5 319 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OR13C3Q8NGS6 347 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.91□□□□□ -1.94
VIM-210ENST00000637053 DTD1Q8TEA8 209 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GPX8Q8TED1 209 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OIT3Q8WWZ8 545 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms