RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SYTL1Q8IYJ3 562 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 C4orf33Q8N1A6 199 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PLD6Q8N2A8 252 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TBC1D19Q8N5T2 526 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 LMNTD1Q8N9Z9 388 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 OR4D9Q8NGE8 314 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 OR2I1PQ8NGU4 316 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 IFI44Q8TCB0 444 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TCP10LQ8TDR4 215 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 DENND1AQ8TEH3 1009 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF480Q8WV37 535 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PATE1Q8WXA2 126 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM74Q96NL1 305 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SARGQ9BW04 601 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ERVK-6Q9BXR3 956 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PITPNM3Q9BZ71 974 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 C1GALT1Q9NS00 363 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 WWOXQ9NZC7 414 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 CD274Q9NZQ7 290 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM216Q9P0N5 145 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SIRPGQ9P1W8 387 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PDP2Q9P2J9 529 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 OPTCQ9UBM4 332 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ADAMTS6Q9UKP5 1117 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 POMT2Q9UKY4 750 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ICKQ9UPZ9 632 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TDRKHQ9Y2W6 561 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 KCNE2Q9Y6J6 123 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 RNF215Q9Y6U7 377 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 UNC13CQ8NB66 2214 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SNRNP200O75643 2136 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 GVINP1Q7Z2Y8 2422 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 A0A0J9YY10 115 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM120BA0PK00 339 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 D6RAR5 112 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GOLGA8RI6L899 631 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TM4SF5O14894 197 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 KLF11O14901 512 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GIPC1O14908 333 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 HGSO14964 777 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PRICKLE3O43900 615 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 SH3BP5O60239 455 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 SYF2O95926 243 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CHRM5P08912 532 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CPA3P15088 417 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EPB42P16452 691 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GNAZP19086 355 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 NR1D1P20393 614 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 IMPDH1P20839 514 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CXCR2P25025 360 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GRK2P25098 689 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CMPK1P30085 196 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CCKBRP32239 447 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 HPDP32754 393 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 RPA3P35244 121 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CASP2P42575 452 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GLRBP48167 497 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 HK2P52789 917 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PKNOX1P55347 436 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PPP2R2AP63151 447 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EIF3IQ13347 325 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 LAPTM5Q13571 262 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 SPIDRQ14159 915 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PCLAFQ15004 111 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 OR4D1Q15615 310 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TBCCQ15814 346 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PDK4Q16654 411 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TUBB8Q3ZCM7 444 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GGTA1PQ4G0N0 100 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TTMPQ5BVD1 217 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PRAMEF13Q5VWM6 474 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 DUS1LQ6P1R4 473 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GUSBP11Q6P575 273 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM71Q6P5X7 295 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 SPESP1Q6UW49 350 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 NAPRTQ6XQN6 538 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 RNF165Q6ZSG1 346 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CDHR3Q6ZTQ4 885 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EFL1Q7Z2Z2 1120 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 C17orf64Q86WR6 236 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 LRRC56Q8IYG6 542 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ADGRF3Q8IZF5 1079 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CCDC63Q8NA47 563 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TTLQ8NG68 377 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 DLG3Q92796 817 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 UBE2E3Q969T4 207 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ZUFSPQ96AP4 578 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 WDR34Q96EX3 536 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 GFM1Q96RP9 751 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PKP4Q99569 1192 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CCDC3Q9BQI4 270 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM79Q9BSE2 394 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EFCAB11Q9BUY7 163 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms