RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 KATNBL1Q9H079 304 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 OR2AG1Q9H205 316 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TBCCD1Q9NVR7 557 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DKK3Q9UBP4 350 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 NOP16Q9Y3C1 178 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PEX16Q9Y5Y5 336 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DISP1Q96F81 1524 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PCP4L1A6NKN8 68 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 H7C417 338 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 BCAS1O75363 584 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CALCAP01258 141 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IFNA5P01569 189 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PEPDP12955 493 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CCNCP24863 283 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KLRK1P26718 216 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SLC6A4P31645 630 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HNF1BP35680 557 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DLSTP36957 453 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PBX3P40426 434 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ACADVLP49748 655 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GSTM4Q03013 218 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MXD1Q05195 221 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DMWDQ09019 674 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CARD16Q5EG05 197 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 NKAPLQ5M9Q1 402 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RAB12Q6IQ22 244 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 AMIGO2Q86SJ2 522 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MMAAQ8IVH4 418 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 S100A16Q96FQ6 103 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CMTM7Q96FZ5 175 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ERVK-5Q9HDB9 667 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHA2Q9Y5H9 948 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IRS2Q9Y4H2 1338 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DISP2A7MBM2 1401 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MYO3AQ8NEV4 1616 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SPATA31C2B4DYI2 1134 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RPP14O95059 124 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RPLP0P05388 317 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HTR1AP08908 422 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ACP5P13686 325 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 OXTRP30559 389 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GSTT1P30711 240 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RAB31Q13636 194 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM119Q4V9L6 283 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF554Q86TJ5 538 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TMCO6Q96DC7 493 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM41AQ96HV5 264 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ARL5BQ96KC2 179 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SAMD11Q96NU1 681 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CD180Q99467 661 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TBX5Q99593 518 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IRF2BPLQ9H1B7 796 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KCNH6Q9H252 994 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ALG2Q9H553 416 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 OPA3Q9H6K4 179 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FZD3Q9NPG1 666 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 EURLQ9NYK6 297 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TESMINQ9Y4I5 508 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CLTCL1P53675 1640 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ANKRD63C9JTQ0 380 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 B4GALT2O60909 372 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 INMTO95050 263 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 INHAP05111 366 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ZSCAN5DPP0CG00 497 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GSTM3P21266 225 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CTHP32929 405 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DPP6P42658 865 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 NR0B1P51843 470 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RPL6Q02878 288 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ADAM15Q13444 863 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CHRFAM7AQ494W8 412 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DUSP28Q4G0W2 176 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 INTS6LQ5JSJ4 861 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 VARS2Q5ST30 1063 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PRAMEF14Q5SWL7 426 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PRAMEF13Q5VWM6 474 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SLC39A4Q6P5W5 647 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RFWD3Q6PCD5 774 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RBM44Q6ZP01 1051 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DPY19L3Q6ZPD9 716 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DEFB119Q8N690 84 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ALPK1Q96QP1 1244 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 NODALQ96S42 347 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MAPKAP1Q9BPZ7 522 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ACBD6Q9BR61 282 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TMLHEQ9NVH6 421 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 C1orf109Q9NX04 203 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GSKIPQ9P0R6 139 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FTSJ1Q9UET6 329 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IL20RAQ9UHF4 553 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SCP2D1Q9UJQ7 156 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ZFR2Q9UPR6 939 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FER1L4A9Z1Z3 1794 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 C1orf167Q5SNV9 1468 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CROCCQ5TZA2 2017 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SAP18O00422 153 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms