RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZNF285Q96NJ3 590 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 CCNL2Q96S94 520 aaPredicted RBP14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 EGFL8Q99944 293 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 ZFYVE21Q9BQ24 234 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 UNKQ9C0B0 810 aaKnown RBP14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 IGSF5Q9NSI5 407 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 TMEM184CQ9NVA4 438 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 RNF112Q9ULX5 631 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 SRPK3Q9UPE1 567 aa14.15□□□□□ -0.14
CDC42BPB-209ENST00000634889 KERAO60938 352 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 KLHL2O95198 593 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 TUBBP07437 444 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 CCNYL3P0C7X3 344 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 NPPBP16860 134 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 TFEBP19484 476 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ITPKBP27987 946 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 TMPRSS3P57727 454 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 YBX1P67809 324 aaKnown RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 DLG1Q12959 904 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ACAP2Q15057 778 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 OR4D1Q15615 310 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ERCC6LQ2NKX8 1250 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 MANEAQ5SRI9 462 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 SULT1C3Q6IMI6 304 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 KLC3Q6P597 504 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 EMBQ6PCB8 327 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 KLHDC8AQ8IYD2 350 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 PDPRQ8NCN5 879 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 RHEBL1Q8TAI7 183 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 KCTD4Q8WVF5 259 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 KIAA1143Q96AT1 154 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 PYCR2Q96C36 320 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 CABS1Q96KC9 395 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 DPH2Q9BQC3 489 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 SELENOSQ9BQE4 189 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 EFHD1Q9BUP0 239 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 SLC7A5P2Q9GIP4 190 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ALG9Q9H6U8 611 aa14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 CNOT10Q9H9A5 744 aaKnown RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ACTR5Q9H9F9 607 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 PSMC3IPQ9P2W1 217 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPB-209ENST00000634889 ANKRD12Q6UB98 2062 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 IQANK1A0A1B0GTG1 560 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 TEX51A0A1B0GUA7 166 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 FITM1A5D6W6 292 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 SYCE1LA8MT33 242 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 TRIM49D1C9J1S8 452 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ZNF749O43361 778 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 IPO13O94829 963 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 S100BP04271 92 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 NTRK1P04629 796 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 KLK3P07288 261 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 COL6A2P12110 1019 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 RORAP35398 523 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 GGT5P36269 586 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 SLC6A12P48065 614 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 IRF9Q00978 393 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 PTCHD3Q3KNS1 767 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 YOD1Q5VVQ6 348 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 RHBDD2Q6NTF9 364 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 FBXO42Q6P3S6 717 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ZNF517Q6ZMY9 492 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 TIFABQ6ZNK6 161 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ADCK2Q7Z695 626 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 AENQ8WTP8 325 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 CAVIN3Q969G5 261 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ALKBH8Q96BT7 664 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 CLIP3Q96DZ5 547 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 OR4K3Q96R72 315 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ATOH8Q96SQ7 321 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 FAM117AQ9C073 453 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 VPS11Q9H270 941 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 LHX9Q9NQ69 397 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 CUEDC1Q9NWM3 386 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 IRAK4Q9NWZ3 460 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 NUDT4Q9NZJ9 180 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 PADI1Q9ULC6 663 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 V9GYY5 206 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 URB1O60287 2271 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
CDC42BPB-209ENST00000634889 A0A0J9YVX5 310 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 NCF1BA6NI72 391 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 NCF1CA8MVU1 366 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 H7BY64 318 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 MEN1O00255 615 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 NRP2O60462 931 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 NCF1P14598 390 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 GMPRP36959 345 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 HSD17B3P37058 310 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 GCGRP47871 477 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 ARSFP54793 590 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 RPS15AP62244 130 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 GPS2Q13227 327 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 GRM7Q14831 915 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 RASA2Q15283 850 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 TSNAXIP1Q2TAA8 658 aa14.12□□□□□ -0.15
CDC42BPB-209ENST00000634889 PRAMEF17Q5VTA0 474 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms