RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 HTR1BP28222 390 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 HMOX2P30519 316 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ADSLP30566 484 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CTSKP43235 329 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CPA2P48052 419 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 PTK2BQ14289 1009 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CAPRIN2Q6IMN6 1127 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 AGTRAPQ6RW13 159 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 UNC5DQ6UXZ4 953 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 POU5F2Q8N7G0 328 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SNX31Q8N9S9 440 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 PPFIBP2Q8ND30 876 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 OR5AR1Q8NGP9 310 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 OR56A3Q8NH54 315 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ZNF480Q8WV37 535 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 BIRC7Q96CA5 298 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 HBEGFQ99075 208 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 FARSBQ9NSD9 589 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TAS2R1Q9NYW7 299 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 FTSJ1Q9UET6 329 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TAGLN3Q9UI15 199 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ACSL5Q9ULC5 683 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 G3BP2Q9UN86 482 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ASF1AQ9Y294 204 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TDRD6O60522 2096 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 PRSS38A1L453 326 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SCAMP1O15126 338 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 UBDO15205 165 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC22A2O15244 555 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC35G4P0C7Q5 338 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 RPL10P27635 214 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CPOXP36551 454 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CCR5P51681 352 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CYP4F3Q08477 520 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 NFATC4Q14934 902 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ABRAXAS2Q15018 415 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 KIAA0895LQ68EN5 471 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 MYLK4Q86YV6 388 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC22A18ASQ8N1D0 253 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 PHC3Q8NDX5 983 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TFGQ92734 400 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TUBGCP3Q96CW5 907 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CMTM5Q96DZ9 223 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 OSGEPL1Q9H4B0 414 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 ACTR8Q9H981 624 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 TRPS1Q9UHF7 1281 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 SH2B3Q9UQQ2 575 aa9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 CFAP20Q9Y6A4 193 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-223ENST00000627587 A0A1B0GTQ1 180 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 CFAP73A6NFT4 308 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 PRAMEF26H0Y7S4 382 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 H0YHG0 523 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 TOR1BO14657 336 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 FFAR3O14843 346 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 GPR42O15529 346 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 WFS1O76024 890 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 CLDN9O95484 217 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 LDOC1O95751 146 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 KRT16P08779 473 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 ERGP11308 486 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 EZRP15311 586 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 PIK3R1P27986 724 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 PTPN4P29074 926 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 GNPDA1P46926 289 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 CLCNKAP51800 687 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 MNAT1P51948 309 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 THOP1P52888 689 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 YPEL5P62699 121 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 NAE1Q13564 534 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 E2F2Q14209 437 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 FASTKQ14296 549 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 GGTA1PQ4G0N0 100 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 DUS1LQ6P1R4 473 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 ENPP7Q6UWV6 458 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 RNF165Q6ZSG1 346 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 ABI3BPQ7Z7G0 1075 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 THOC6Q86W42 341 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 DCUN1D3Q8IWE4 304 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 SYTL1Q8IYJ3 562 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 CACTIN-AS1Q8N1I8 211 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 L3MBTL4Q8NA19 623 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 LSM14AQ8ND56 463 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 OR9A1PQ8NGU1 263 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 USP7Q93009 1102 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 RAD51AP1Q96B01 352 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 MED8Q96G25 268 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC45A3Q96JT2 553 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 MAGEB10Q96LZ2 347 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 WDR92Q96MX6 357 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 UBL7Q96S82 380 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 TBC1D10AQ9BXI6 508 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms