RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NPPBP16860 134 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 ZNF28P17035 718 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 HRH2P25021 359 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SLC6A12P48065 614 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 GLRBP48167 497 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 KCNC1P48547 511 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 ITGA1P56199 1179 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 TSNAXIP1Q2TAA8 658 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SULT1C3Q6IMI6 304 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 RNF44Q7L0R7 432 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 C17orf64Q86WR6 236 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 KLHDC8AQ8IYD2 350 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 EPS8L3Q8TE67 593 aaKnown RBP19.48■□□□□ 0.71
PTCD3-220ENST00000627371 KCNE4Q8WWG9 221 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 EXT2Q93063 718 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 OR4K3Q96R72 315 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 CUEDC1Q9NWM3 386 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-220ENST00000627371 EURLQ9NYK6 297 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 WWOXQ9NZC7 414 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 CD274Q9NZQ7 290 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SERTAD3Q9UJW9 196 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 PILRAQ9UKJ1 303 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 ZMIZ1Q9ULJ6 1067 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SNX7Q9UNH6 387 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SH2B3Q9UQQ2 575 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 FER1L5A0AVI2 2057 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 SEC16AO15027 2179 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 SYCE1LA8MT33 242 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 H3BMH7 237 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 CDH16O75309 829 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 SCRG1O75711 98 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 IPO13O94829 963 aaKnown RBP19.47■□□□□ 0.71
PTCD3-220ENST00000627371 KIAA0754O94854 1291 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 S100BP04271 92 aaPredicted RBP19.47■□□□□ 0.71
PTCD3-220ENST00000627371 GGT5P36269 586 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 SLCO1A2P46721 670 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 RELAQ04206 551 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 TECRLQ5HYJ1 363 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 TMEM126BQ8IUX1 230 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 MCATQ8IVS2 390 aaKnown RBP19.47■□□□□ 0.71
PTCD3-220ENST00000627371 OR2W6PQ8NHA6 318 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 TMEM79Q9BSE2 394 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 DPH1Q9BZG8 443 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 PCMTD2Q9NV79 361 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 TMEM184CQ9NVA4 438 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 ZNF358Q9NW07 568 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 PCDHB3Q9Y5E6 796 aa19.47■□□□□ 0.71
PTCD3-220ENST00000627371 SMIM23A6NLE4 172 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 SUPT3HB4E1H0 165 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 E7EQ34 232 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 H7BY64 318 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 UBXN8O00124 270 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 TAPBPO15533 448 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 RRP8O43159 456 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 SUPT3HO75486 399 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 OR2B3O76000 313 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 EZRP15311 586 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 CLN3Q13286 438 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 MAP7Q14244 749 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 C18orf21Q32NC0 220 aaPredicted RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 ADCK2Q7Z695 626 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 THOC6Q86W42 341 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 GPR135Q8IZ08 494 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 ACMSDQ8TDX5 336 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 NAF1Q96HR8 494 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 TSNARE1Q96NA8 513 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 ZNF285Q96NJ3 590 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 PRAP1Q96NZ9 151 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 DCBLD2Q96PD2 775 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 ZFYVE21Q9BQ24 234 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 CNOT10Q9H9A5 744 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 PTBP2Q9UKA9 531 aaKnown RBP19.46■□□□□ 0.71
PTCD3-220ENST00000627371 SLC22A14Q9Y267 594 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 USP24Q9UPU5 2620 aa19.46■□□□□ 0.71
PTCD3-220ENST00000627371 A0A087WV48 116 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 A0A0J9YVX5 310 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 RAD1O60671 282 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 CPNE3O75131 537 aaKnown RBP19.45■□□□□ 0.7
PTCD3-220ENST00000627371 WDR47O94967 919 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 CTSBP07858 339 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 RBP1P09455 135 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 CDH1P12830 882 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 MTHFD2P13995 350 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 PRAMEF17Q5VTA0 474 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 FBXO42Q6P3S6 717 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 TIPARPQ7Z3E1 657 aaKnown RBP19.45■□□□□ 0.7
PTCD3-220ENST00000627371 LCA5Q86VQ0 697 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 NLGN4XQ8N0W4 816 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 RIBC1Q8N443 379 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-220ENST00000627371 ABHD11Q8NFV4 315 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 NLGN4YQ8NFZ3 816 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-220ENST00000627371 SLC5A11Q8WWX8 675 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 RNF31Q96EP0 1072 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 SELENOSQ9BQE4 189 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 ENAMQ9NRM1 1142 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 AP1M2Q9Y6Q5 423 aa19.45■□□□□ 0.7
PTCD3-220ENST00000627371 HAT1O14929 419 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 ZSCAN9O15535 394 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-220ENST00000627371 SRPX2O60687 465 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-220ENST00000627371 MT-ND3P03897 115 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms