RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ELOCQ15369 112 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TEAD4Q15561 434 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 AP5B1Q2VPB7 878 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 DNAL1Q4LDG9 190 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PDCD4Q53EL6 469 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 AGKQ53H12 422 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SGO1Q5FBB7 561 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 C6orf136Q5SQH8 315 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CACHD1Q5VU97 1274 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PRAMEF9Q5VWM5 478 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 MED27Q6P2C8 311 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 IYDQ6PHW0 289 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SUSD1Q6UWL2 747 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 Q6ZSR9 355 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TAF8Q7Z7C8 310 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TMPRSS11BQ86T26 416 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 LONP2Q86WA8 852 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ZFAND4Q86XD8 727 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TRIM48Q8IWZ4 208 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 RBM12BQ8IXT5 1001 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 FAM9CQ8IZT9 166 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 KRT78Q8N1N4 520 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ARHGAP24Q8N264 748 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SDR16C5Q8N3Y7 309 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 DEFB119Q8N690 84 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PRSS33Q8NF86 280 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 OR52E1Q8NGJ3 308 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 OR2T11Q8NH01 316 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CCL4L1Q8NHW4 92 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 WDR20Q8TBZ3 569 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SLC7A6OSQ96CW6 309 aaPredicted RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CMTM7Q96FZ5 175 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 METTL2AQ96IZ6 378 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 IL17FQ96PD4 163 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 BTBD10Q9BSF8 475 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 RTKNQ9BST9 563 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ACPTQ9BZG2 426 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 BRINP2Q9C0B6 783 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 MIR1-1HGQ9H1L0 117 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 C1orf21Q9H246 121 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 LRTM1Q9HBL6 345 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SDR39U1Q9NRG7 319 aaPredicted RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 FARSBQ9NSD9 589 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 POT1Q9NUX5 634 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 AIG1Q9NVV5 245 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 NMRK1Q9NWW6 199 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 C1orf109Q9NX04 203 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ASIC5Q9NY37 505 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 OR6C2Q9NZP2 312 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SCHIP1Q9P0W5 487 aaPredicted RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ICKQ9UPZ9 632 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 EIF3LQ9Y262 564 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TMED5Q9Y3A6 229 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TSC22D4Q9Y3Q8 395 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CCL27Q9Y4X3 112 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PCDHB11Q9Y5F2 797 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 A0A1W2PPV9 198 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 PIPSLA2A3N6 862 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 FAM221BA6H8Z2 402 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 BBIP1A8MTZ0 92 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 B2RBV5 119 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 ANKRD65E5RJM6 399 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 FOXE1O00358 373 aaPredicted RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 VILLO15195 856 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 SEC22BO75396 215 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 PDGFBP01127 241 aaPredicted RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 VIPP01282 170 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 WNT1P04628 370 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 SNRPB2P08579 225 aaKnown RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 PCNAP12004 261 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 CDH1P12830 882 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 TDGF1P13385 188 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 NQO1P15559 274 aaKnown RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 CD22P20273 847 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 GPX3P22352 226 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 VARSP26640 1264 aaKnown RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 MAPK1P28482 360 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 SLC19A1P41440 591 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 PIK3CBP42338 1070 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 FNTBP49356 437 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 CCR8P51685 355 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 NXPH1P58417 271 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 HNRNPKP61978 463 aaKnown RBP eCLIP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 RPL38P63173 70 aaKnown RBP7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 DMWDQ09019 674 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 LYSMD4Q5XG99 296 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 ICE2Q659A1 982 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 SLC9B2Q86UD5 537 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 AMIGO1Q86WK6 493 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 SNX32Q86XE0 403 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 GKN2Q86XP6 184 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 C1orf210Q8IVY1 113 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 LAS2Q8IYD9 372 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 TMEFF1Q8IYR6 380 aa7.27□□□□□ -1.25
PTP4A1-206ENST00000627002 C2orf73Q8N5S3 287 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms