RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
SNX1-214ENST00000625244 TAZQ16635 292 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 MEP1AQ16819 746 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 HADHQ16836 314 aaKnown RBP13.12□□□□□ -0.31
SNX1-214ENST00000625244 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 EMC4Q5J8M3 183 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 PLAG1Q6DJT9 500 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 OLFM1Q99784 485 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 HAUS4Q9H6D7 363 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 NEUROD4Q9HD90 331 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
SNX1-214ENST00000625244 INTS7Q9NVH2 962 aaKnown RBP13.12□□□□□ -0.31
SNX1-214ENST00000625244 C14orf105Q9NVL8 296 aa13.12□□□□□ -0.31
SNX1-214ENST00000625244 GABRR3A8MPY1 467 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 NRP2O60462 931 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 CDC40O60508 579 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■■ 31.7
SNX1-214ENST00000625244 SUN1O94901 812 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 EIF2S1P05198 315 aaKnown RBP13.11□□□□□ -0.31
SNX1-214ENST00000625244 C8orf89P0DMQ9 161 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 PTPN3P26045 913 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
SNX1-214ENST00000625244 BRD3Q15059 726 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
SNX1-214ENST00000625244 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 AMER3Q8N944 861 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 ULK4Q96C45 1275 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 OXNAD1Q96HP4 312 aaPredicted RBP13.11□□□□□ -0.31
SNX1-214ENST00000625244 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 IL17FQ96PD4 163 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 RNF157Q96PX1 679 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 MENTQ9BUN1 341 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 KCNK13Q9HB14 408 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 CIDEBQ9UHD4 219 aa13.11□□□□□ -0.31
SNX1-214ENST00000625244 IGLV3-16A0A075B6K0 115 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 A0A0J9YVX5 310 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 H7C1Q1 480 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 TFECO14948 347 aaPredicted RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 NME2P1O60361 137 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 SLC25A12O75746 678 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 TFEBP19484 476 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 NFKB1P19838 968 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 NME2P22392 152 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 SLC26A3P40879 764 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 RFC3P40938 356 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 NR0B1P51843 470 aaKnown RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 TAS2R40P59535 323 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 ZBED6P86452 979 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 PDK1Q15118 436 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 SF1Q15637 639 aaKnown RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 MUM1Q2TAK8 710 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 CMPK2Q5EBM0 449 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 SHEQ5VZ18 495 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 UNC5DQ6UXZ4 953 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 LANCL3Q6ZV70 420 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 ZC3H7AQ8IWR0 971 aaKnown RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 HORMAD2Q8N7B1 307 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 IPMKQ8NFU5 416 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 HEXDCQ8WVB3 486 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 ISCUQ9H1K1 167 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 ZNHIT6Q9NWK9 470 aaKnown RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 ZDHHC3Q9NYG2 299 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 CBLCQ9ULV8 474 aa13.1□□□□□ -0.31
SNX1-214ENST00000625244 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
SNX1-214ENST00000625244 CCL22O00626 93 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 LIN7AO14910 233 aaPredicted RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 SMAD7O15105 426 aaKnown RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 HS6ST1O60243 411 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 S1PR4O95977 384 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 CD9P21926 228 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 PRKCIP41743 596 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 TAF1AQ15573 450 aaPredicted RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 PRTGQ2VWP7 1150 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 E4F1Q66K89 784 aaPredicted RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 CPEB2Q7Z5Q1 589 aaKnown RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 SNX20Q7Z614 316 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 ZNF227Q86WZ6 799 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 VSTM4Q8IW00 320 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 OR10Q1Q8NGQ4 319 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 OR13C4Q8NGS5 318 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 ZUFSPQ96AP4 578 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 SLC22A18Q96BI1 424 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 CABS1Q96KC9 395 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 FICDQ9BVA6 458 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms