RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CKAP2Q8WWK9 683 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 STARD8Q92502 1023 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 UBXN10Q96LJ8 280 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PAIP2Q9BPZ3 127 aaKnown RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 MECRQ9BV79 373 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PITPNM3Q9BZ71 974 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 CCDC134Q9H6E4 229 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 FANCEQ9HB96 536 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 LHX9Q9NQ69 397 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 STARD5Q9NSY2 213 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 SOHLH2Q9NX45 425 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 XPR1Q9UBH6 696 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 TRMT6Q9UJA5 497 aaKnown RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 IKZF3Q9UKT9 509 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 DHRS7Q9Y394 339 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 ZNF462Q96JM2 2506 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 ANKRD12Q6UB98 2062 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 COL6A6A6NMZ7 2263 aa12.21□□□□□ -0.46
PNKP-217ENST00000625216 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 SLC9B1P1A6NJY1 282 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 BTN3A3O00478 584 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 BTN3A1O00481 513 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 TERTO14746 1132 aaKnown RBP12.2□□□□□ -0.46
PNKP-217ENST00000625216 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 CHRM3P20309 590 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 SHMT2P34897 504 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 SERPINB4P48594 390 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 CDC20Q12834 499 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 PRKG2Q13237 762 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 PCLAFQ15004 111 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 CCDC91Q7Z6B0 441 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 LCA5Q86VQ0 697 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 ADGRF3Q8IZF5 1079 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 OR5K2Q8NHB8 316 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 APOBEC4Q8WW27 367 aaKnown RBP12.2□□□□□ -0.46
PNKP-217ENST00000625216 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 ASZ1Q8WWH4 475 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 PTERQ96BW5 349 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
PNKP-217ENST00000625216 LINGO1Q96FE5 620 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 SCYL1Q96KG9 808 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 LRFN5Q96NI6 719 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 GPR87Q9BY21 358 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 OR6C2Q9NZP2 312 aa12.2□□□□□ -0.46
PNKP-217ENST00000625216 RUVBL2Q9Y230 463 aaKnown RBP12.2□□□□□ -0.46
PNKP-217ENST00000625216 PIPSLA2A3N6 862 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 WDR91A4D1P6 747 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TARM1B6A8C7 271 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 G3V2L1 256 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 KPNA5O15131 536 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 ZBTB14O43829 449 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CPNE3O75131 537 aaKnown RBP12.19□□□□□ -0.46
PNKP-217ENST00000625216 GPC4O75487 556 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 SCRG1O75711 98 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TIAF1O95411 115 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 RPN2P04844 631 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 APOA4P06727 396 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 BPGMP07738 259 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CD1DP15813 335 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TFEBP19484 476 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 F8A1P23610 371 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CCR7P32248 378 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 LSP1P33241 339 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 SLC26A3P40879 764 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 GBX1Q14549 363 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 PDK4Q16654 411 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CCDC153Q494R4 210 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 UGT3A1Q6NUS8 523 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 NAPRTQ6XQN6 538 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 SLC22A15Q8IZD6 547 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TMEM151AQ8N4L1 468 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 ZBTB2Q8N680 514 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CCDC63Q8NA47 563 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 OR5AR1Q8NGP9 310 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TRAPPC9Q96Q05 1148 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 HGH1Q9BTY7 390 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 DERL2Q9GZP9 239 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 NMRAL1Q9HBL8 299 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 ACTR10Q9NZ32 417 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
PNKP-217ENST00000625216 SERTAD3Q9UJW9 196 aa12.19□□□□□ -0.46
PNKP-217ENST00000625216 HEMK1Q9Y5R4 338 aaPredicted RBP12.19□□□□□ -0.46
PNKP-217ENST00000625216 HELZ2Q9BYK8 2649 aaKnown RBP12.19□□□□□ -0.46
PNKP-217ENST00000625216 SPTA1P02549 2419 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 J3QKU1 62 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 KATNA1O75449 491 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 NTRK1P04629 796 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 KLK3P07288 261 aaPredicted RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 TAC1P20366 129 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms