RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SMPDL3AQ92484 453 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 GTF2H4Q92759 462 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 NEIL2Q969S2 332 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 ZNF570Q96NI8 536 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 SLC39A3Q9BRY0 314 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 MKRN2Q9H000 416 aaKnown RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 PCDHAC1Q9H158 963 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 NT5DC2Q9H857 520 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 AHSPQ9NZD4 102 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 ZFR2Q9UPR6 939 aaKnown RBP15.81■□□□□ 0.12
LDB3-208ENST00000623007 TMEM98Q9Y2Y6 226 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 DTNAQ9Y4J8 743 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 TRPM6Q9BX84 2022 aa15.81■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3DA0A087WVF3 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3IA0A087WXS9 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3EA0A087X179 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3KA0A087X1G2 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 DHRS12A0PJE2 317 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3FA6NER0 549 aaPredicted RBP15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3LB9A6J9 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 EGFP01133 1207 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3HP0C7X1 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 IDSP22304 550 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 GSTM2P28161 218 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 KIR3DL1P43629 444 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 KIAA1024LP59773 190 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 KLC1Q07866 573 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 MTAPQ13126 283 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 CAPRIN1Q14444 709 aaKnown RBP15.8■□□□□ 0.12
LDB3-208ENST00000623007 THEMIS2Q5TEJ8 643 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3GQ6DHY5 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 CAPRIN2Q6IMN6 1127 aaKnown RBP15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3CQ6IPX1 549 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 DOK6Q6PKX4 331 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 SUSD1Q6UWL2 747 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TRIM69Q86WT6 500 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D3Q8IZP1 549 aaPredicted RBP15.8■□□□□ 0.12
LDB3-208ENST00000623007 OR8J2Q8NGG1 315 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 SCARF2Q96GP6 870 aaPredicted RBP15.8■□□□□ 0.12
LDB3-208ENST00000623007 APOLD1Q96LR9 279 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 GBP5Q96PP8 586 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 HHIPQ96QV1 700 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 MVB12BQ9H7P6 319 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 RIMS3Q9UJD0 308 aa15.8■□□□□ 0.12
LDB3-208ENST00000623007 A0A1W2PQF6 199 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 LRRC72A6NJI9 287 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 ARPC2O15144 300 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 PRAMEF4O60810 478 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 RPSAP08865 295 aaKnown RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 PPIBP23284 216 aaKnown RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 NDUFS1P28331 727 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 HPCAL1P37235 193 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 GRIA3P42263 894 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 NEK2P51955 445 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 PON2Q15165 354 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 GRAMD1BQ3KR37 738 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 CCSMST1Q4G0I0 132 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 SPANXN4Q5MJ08 99 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 ANXA8L1Q5VT79 327 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 PRAMEF9Q5VWM5 478 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 R3HCC1LQ7Z5L2 792 aaKnown RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 CAMKMTQ7Z624 323 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 C17orf64Q86WR6 236 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 RIMKLAQ8IXN7 391 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 NATD1Q8N6N6 113 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 FAM156AQ8NDB6 213 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 EZH1Q92800 747 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 C11orf24Q96F05 449 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 APIPQ96GX9 242 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 APOOQ9BUR5 198 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 SERGEFQ9UGK8 458 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 CORO2BQ9UQ03 480 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 ADAM23O75077 832 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 COL4A2P08572 1712 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 PCNAP12004 261 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 CD22P20273 847 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 PTX3P26022 381 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 HTR1BP28222 390 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 SMAD4Q13485 552 aaKnown RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 KIAA1211LQ6NV74 962 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 XKR5Q6UX68 686 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 APLFQ8IW19 511 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 HUS1BQ8NHY5 278 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 CHTF18Q8WVB6 975 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 NELL1Q92832 810 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 MTERF3Q96E29 417 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 TMEM74Q96NL1 305 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 AIF1LQ9BQI0 150 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 SPATA9Q9BWV2 254 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 GORASP2Q9H8Y8 452 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 COPS7BQ9H9Q2 264 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 MBNL1Q9NR56 388 aaKnown RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 ATAD3AQ9NVI7 634 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.79■□□□□ 0.12
LDB3-208ENST00000623007 RAB26Q9ULW5 256 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 AP1M2Q9Y6Q5 423 aa15.79■□□□□ 0.12
LDB3-208ENST00000623007 A0A1W2PPC1 479 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 PIPSLA2A3N6 862 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 EVPLLA8MZ36 301 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 C9JVG2 144 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms