RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 GARNL3Q5VVW2 1013 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 PPFIBP2Q8ND30 876 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 CPT1CQ8TCG5 803 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 ZNF480Q8WV37 535 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 MVB12AQ96EY5 273 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 SNF8Q96H20 258 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 ZNF285Q96NJ3 590 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 NDNQ99608 321 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 CRB3Q9BUF7 120 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 NUDT9Q9BW91 350 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 YIPF2Q9BWQ6 316 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 SLC29A3Q9BZD2 475 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 SLC6A20Q9NP91 592 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 SEMA3GQ9NS98 782 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
ATRX-208ENST00000622960 A0A1W2PPV9 198 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 MAP2K7O14733 419 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 SNRNP200O75643 2136 aaKnown RBP12.48□□□□□ -0.41
ATRX-208ENST00000622960 PDGFAP04085 211 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 CXCR2P25025 360 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 GRK3P35626 688 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 OR1D4P47884 311 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 EMP3P54852 163 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 MLLT10P55197 1068 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 NKG7Q16617 165 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 PRAMEF13Q5VWM6 474 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 FAM45BPQ6NSW5 357 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 ZNF549Q6P9A3 640 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
ATRX-208ENST00000622960 PPP1R32Q7Z5V6 425 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 ZADH2Q8N4Q0 377 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 GPATCH11Q8N954 259 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 BBOF1Q8ND07 529 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 FAM45AQ8TCE6 357 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 MIEF2Q96C03 454 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 CCDC138Q96M89 665 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 SMAD5Q99717 465 aaKnown RBP12.48□□□□□ -0.41
ATRX-208ENST00000622960 SLC30A3Q99726 388 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 ILKAPQ9H0C8 392 aaPredicted RBP12.48□□□□□ -0.41
ATRX-208ENST00000622960 SOX17Q9H6I2 414 aaPredicted RBP12.48□□□□□ -0.41
ATRX-208ENST00000622960 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 C14orf105Q9NVL8 296 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 CHMP2BQ9UQN3 213 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 MAU2Q9Y6X3 613 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 BOD1L1Q8NFC6 3051 aa12.48□□□□□ -0.41
ATRX-208ENST00000622960 LOC105369274A0A096LPK9 316 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 LOC102723532A0A0G2JNH3 316 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 E7ENX8 843 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 H0YGG7 62 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 GFYI3L273 518 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 SLC16A5O15375 505 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 UMODP07911 640 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 F7P08709 466 aaPredicted RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 ACPPP15309 386 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 ELK3P41970 407 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 GCGRP47871 477 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 AVPR1BP47901 424 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 IL2P60568 153 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 RPS15AP62244 130 aaKnown RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 TBPL1P62380 186 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 TAP2Q03519 686 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 ILF2Q12905 390 aaKnown RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 NADK2Q4G0N4 442 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 JMJD6Q6NYC1 403 aaPredicted RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 SHISA6Q6ZSJ9 500 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 GALNT7Q86SF2 657 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 PAQR7Q86WK9 346 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 C17orf64Q86WR6 236 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 IQCKQ8N0W5 287 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 OR4N4Q8N0Y3 316 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 TBC1D19Q8N5T2 526 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 MIB2Q96AX9 1013 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 ALKBH8Q96BT7 664 aaKnown RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 MMABQ96EY8 250 aaPredicted RBP12.47□□□□□ -0.41
ATRX-208ENST00000622960 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 DRC3Q9H069 523 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 EPS8L2Q9H6S3 715 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 PARVBQ9HBI1 364 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 TRPC4Q9UBN4 977 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 CTSFQ9UBX1 484 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 FBXL4Q9UKA2 621 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 PLAAQ9Y263 795 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 SPTBP11277 2137 aa12.47□□□□□ -0.41
ATRX-208ENST00000622960 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
ATRX-208ENST00000622960 EFCAB8A8MWE9 144 aa12.46□□□□□ -0.41
ATRX-208ENST00000622960 PCDH17O14917 1159 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms