RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TCEA2Q15560 299 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 KIF19Q2TAC6 998 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 AP5B1Q2VPB7 878 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ZNF542PQ5EBM4 170 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 MED27Q6P2C8 311 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 IYDQ6PHW0 289 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TAF8Q7Z7C8 310 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TMPRSS11BQ86T26 416 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C11orf74Q86VG3 221 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 WDR5BQ86VZ2 330 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TRIM48Q8IWZ4 208 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TMEFF1Q8IYR6 380 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 POU5F2Q8N7G0 328 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 FNDC5Q8NAU1 212 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 OR52E1Q8NGJ3 308 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LCN9Q8WX39 176 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 MTFMTQ96DP5 389 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 HBEGFQ99075 208 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 BTBD10Q9BSF8 475 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ACPTQ9BZG2 426 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LRTM1Q9HBL6 345 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SDR39U1Q9NRG7 319 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 FARSBQ9NSD9 589 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 AIG1Q9NVV5 245 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TMEM45AQ9NWC5 275 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf109Q9NX04 203 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TAAR2Q9P1P5 351 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 APOBEC3BQ9UH17 382 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CCL27Q9Y4X3 112 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TRIOO75962 3097 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NCOR1O75376 2440 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LOC100653049A0A140TA62 436 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 A0A1W2PPV9 198 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NPIPB8E9PQR5 432 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 GYG2O15488 501 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LAMTOR5O43504 91 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SEC22BO75396 215 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 KRT34O76011 436 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 RSL1D1O76021 490 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CDH1P12830 882 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 XRCC1P18887 633 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 PRPH2P23942 346 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CXCR2P25025 360 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 VARSP26640 1264 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SLC19A1P41440 591 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CPA2P48052 419 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 FNTBP49356 437 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CCR8P51685 355 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NEK2P51955 445 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NXPH1P58417 271 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 MXRA7P84157 204 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 HMGCS1Q01581 520 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 STX5Q13190 355 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SLBPQ14493 270 aaKnown RBP eCLIP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ELOCQ15369 112 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 AGKQ53H12 422 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CATSPEREQ5SY80 951 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LONP2Q86WA8 852 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ZFAND4Q86XD8 727 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SNX32Q86XE0 403 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LAS2Q8IYD9 372 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 KRT78Q8N1N4 520 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C2orf73Q8N5S3 287 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LMNTD1Q8N9Z9 388 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 LINC01555Q8NAE3 123 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ABHD11Q8NFV4 315 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 OR7G3Q8NG95 312 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 WDR20Q8TBZ3 569 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 CMTM7Q96FZ5 175 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 RAB3IPQ96QF0 476 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 RTKNQ9BST9 563 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf50Q9BV19 199 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 BRINP2Q9C0B6 783 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 PITHD1Q9GZP4 211 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 C1orf21Q9H246 121 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 XKR8Q9H6D3 395 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 BRF2Q9HAW0 419 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NMRK1Q9NWW6 199 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 GEMIN8Q9NWZ8 242 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ASIC5Q9NY37 505 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TAS2R1Q9NYW7 299 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 NOP53Q9NZM5 478 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 OR6C2Q9NZP2 312 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TAC3Q9UHF0 121 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 ICKQ9UPZ9 632 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 SH2B3Q9UQQ2 575 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 EIF3LQ9Y262 564 aaKnown RBP6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TMED5Q9Y3A6 229 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 TSC22D4Q9Y3Q8 395 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 PCDHB11Q9Y5F2 797 aa6.75□□□□□ -1.33
CBWD3-219ENST00000622817 GPR45Q9Y5Y3 372 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms