RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 RAPSNQ13702 412 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 TGFBIQ15582 683 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 ARL13AQ5H913 290 aaPredicted RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 INTS11Q5TA45 600 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 VN1R5Q7Z5H4 357 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CADM2Q8N3J6 435 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 TEX19Q8NA77 164 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 RCBTB1Q8NDN9 531 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 HNRNPLLQ8WVV9 542 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 METTL7AQ9H8H3 244 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 COPG2Q9UBF2 871 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 EPHA6Q9UF33 1036 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 SNX11Q9Y5W9 270 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 ZNFX1Q9P2E3 1918 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 TMEM202A6NGA9 273 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 LOC730098B7Z3J9 87 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 BTN3A3O00478 584 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 MYF5P13349 255 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 IRF9Q00978 393 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 GSTA3Q16772 222 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ANXA8L1Q5VT79 327 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 LAIR1Q6GTX8 287 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 RBM44Q6ZP01 1051 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 ADGRG6Q86SQ4 1221 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 RBM12BQ8IXT5 1001 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 SFRP1Q8N474 314 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 C1orf52Q8N6N3 182 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 ARRDC2Q8TBH0 407 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 IFI44Q8TCB0 444 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 TWIST2Q8WVJ9 160 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PEX11GQ96HA9 241 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 GUCD1Q96NT3 240 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 KCNS3Q9BQ31 491 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FSCN3Q9NQT6 498 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ENTPD2Q9Y5L3 495 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FEZF1A0PJY2 475 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CXorf49A8MYA2 514 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 HNRNPCL2B2RXH8 293 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ANKRD65E5RJM6 399 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 H3BQF6 201 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 NUAK1O60285 661 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 HNRNPCL1O60812 293 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 SLC16A8O95907 504 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 RNH1P13489 461 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 CDH2P19022 906 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 PTX3P26022 381 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 AQP1P29972 269 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 OR1D5P58170 312 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 IRX1P78414 480 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 ABATP80404 500 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 BTBD16Q32M84 506 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 MSS51Q4VC12 460 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 SNX32Q86XE0 403 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PIANPQ8IYJ0 282 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CBARPQ8N350 705 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 ZNF276Q8N554 614 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 OR4K17Q8NGC6 315 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 OR52E1Q8NGJ3 308 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 OR10Q1Q8NGQ4 319 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 DNAJB14Q8TBM8 379 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 NELL1Q92832 810 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PEX13Q92968 403 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PGM2Q96G03 612 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ART5Q96L15 291 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 MAP3K3Q99759 626 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FGF21Q9NSA1 209 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 SEMA4GQ9NTN9 838 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 VPS29Q9UBQ0 182 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PHF11Q9UIL8 331 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 RUVBL1Q9Y265 456 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 ZBTB11O95625 1053 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 C9P02748 559 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FEN1P39748 380 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 NCBP2P52298 156 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-229ENST00000622668 EMP2P54851 167 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 BNC1Q01954 994 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PCBP2Q15366 365 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-229ENST00000622668 ANKRD46Q86W74 232 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PIH1D2Q8WWB5 315 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 KHSRPQ92945 711 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-229ENST00000622668 OR6C1Q96RD1 312 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 SEPHS2Q99611 448 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ZFYVE21Q9BQ24 234 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 SLC25A23Q9BV35 468 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 KCNK13Q9HB14 408 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PADI1Q9ULC6 663 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ANGPT4Q9Y264 503 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 UNC13CQ8NB66 2214 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FAM92AA1XBS5 289 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CAPN14A8MX76 684 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 FOXO6A8MYZ6 492 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 AP3D1O14617 1153 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 KCNH1O95259 989 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 NQO1P15559 274 aaKnown RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 RPA4Q13156 261 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 DNAL1Q4LDG9 190 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CEACAM20Q6UY09 585 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 MTDHQ86UE4 582 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms