RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 DNAJA1P31689 397 aaKnown RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 TGFBR2P37173 567 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 PPP5CP53041 499 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ABHD18Q0P651 414 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 NPRL3Q12980 569 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 MADCAM1Q13477 382 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 BOP1Q14137 746 aaKnown RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CAPN13Q6MZZ7 669 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 TRIM46Q7Z4K8 759 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 SCAIQ8N9R8 606 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 TTPALQ9BTX7 342 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ARHGAP39Q9C0H5 1083 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 RAD18Q9NS91 495 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 GPR83Q9NYM4 423 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 M0QX08 132 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 TBL1XO60907 577 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 KCNK2O95069 426 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 EBLN1P0CF75 366 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 ACVR2AP27037 513 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 KDELR2P33947 212 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 KIR3DL1P43629 444 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 DSC1Q08554 894 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 ZNF404Q494X3 552 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 DESI1Q6ICB0 168 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 CXorf57Q6NSI4 855 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 RBFAQ8N0V3 343 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 SPPL2AQ8TCT8 520 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 APH1BQ8WW43 257 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 MAGIXQ9H6Y5 334 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 C14orf119Q9NWQ9 140 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 SLC6A14Q9UN76 642 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 ACPPP15309 386 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 RRM2P31350 389 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 EIF2DP41214 584 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 SLC19A1P41440 591 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 CLDN8P56748 225 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 ADNP2Q6IQ32 1131 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 SYT12Q8IV01 421 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 PCDHB1Q9Y5F3 818 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 PCDHGB1Q9Y5G3 927 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 GOLGA4Q13439 2230 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 OR2A25A4D2G3 310 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 YY2O15391 372 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 NDUFB5O43674 189 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 CYP7B1O75881 506 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 STC2O76061 302 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 KCNK5O95279 499 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 STSP08842 583 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 BPIP17213 487 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 TIGD6Q17RP2 521 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 VMACQ2NL98 169 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 PTCHD3Q3KNS1 767 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 PHF10Q8WUB8 498 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 LINC01599Q8WXQ3 324 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 MYO19Q96H55 970 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 PDLIM5Q96HC4 596 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 TM9SF3Q9HD45 589 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 RLIMQ9NVW2 624 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 CD84Q9UIB8 345 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 NDRG4Q9ULP0 352 aaKnown RBP15.3■□□□□ 0.04
NPHP4-211ENST00000622020 BTBD3Q9Y2F9 522 aa15.3■□□□□ 0.04
NPHP4-211ENST00000622020 ILVBLA1L0T0 632 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 UPK1BO75841 260 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 ANXA5P08758 320 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 COX7A2P14406 83 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 JUNDP17535 347 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 ITGALP20701 1170 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 FPR1P21462 350 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 HNF1BP35680 557 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 IL18R1Q13478 541 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 AKAP14Q86UN6 197 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 SVOPQ8N4V2 548 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 BEND7Q8N7W2 519 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-211ENST00000622020 ZNF566Q969W8 418 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 SH3KBP1Q96B97 665 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 PSD2Q9BQI7 771 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 ITPAQ9BY32 194 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 LHX3Q9UBR4 397 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 RAPGEFL1Q9UHV5 662 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 RNF6Q9Y252 685 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 GLYATL1P3A0A0U1RQE8 302 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 A0A1B0GVM2 712 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 A8MV72 311 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-211ENST00000622020 M0R082 166 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 WNT9AO14904 365 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 TPD52L2O43399 206 aaKnown RBP15.29■□□□□ 0.04
NPHP4-211ENST00000622020 TLL1O43897 1013 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 PLEKHG6Q3KR16 790 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 UBE2R2Q712K3 238 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-211ENST00000622020 SLC24A5Q71RS6 500 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 NLGN4XQ8N0W4 816 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 CELF2-AS1Q8N7Q2 184 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 FBLIM1Q8WUP2 373 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 FOXJ1Q92949 421 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 USP7Q93009 1102 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 KCNS3Q9BQ31 491 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 CENPOQ9BU64 300 aa15.29■□□□□ 0.04
NPHP4-211ENST00000622020 OSGIN1Q9UJX0 560 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms