RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 HGFP14210 728 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 JUPP14923 745 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TYRP1P17643 537 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TGM1P22735 817 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 HRH2P25021 359 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CXCR2P25025 360 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 SERPINB3P29508 390 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ALDH4A1P30038 563 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CMPK1P30085 196 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PEBP1P30086 187 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 HNF4AP41235 474 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 HK2P52789 917 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 EPHA4P54764 986 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 FOXA1P55317 472 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 OR1D5P58170 312 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 YBX1P67809 324 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 SPEM2Q0P670 501 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 SLC14A1Q13336 389 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 LAPTM5Q13571 262 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 NR1D2Q14995 579 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 GGTA1PQ4G0N0 100 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 XKR6Q5GH73 641 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CATSPEREQ5SY80 951 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ICE2Q659A1 982 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CGB2Q6NT52 195 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ARMC6Q6NXE6 501 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 EFL1Q7Z2Z2 1120 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PIGWQ7Z7B1 504 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 C17orf64Q86WR6 236 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 OOSP2Q86WS3 158 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 AFAP1L2Q8N4X5 818 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CDYL2Q8N8U2 506 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 OR2L3Q8NG85 312 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 FLVCR1-AS1Q8TAF5 88 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 METTL6Q8TCB7 284 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PTCD3Q96EY7 689 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PRAP1Q96NZ9 151 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CDK15Q96Q40 435 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 OR2A14Q96R47 310 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ELAC2Q9BQ52 826 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TRIM55Q9BYV6 548 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 RAB33BQ9H082 229 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 NSRP1Q9H0G5 558 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 EPB41L1Q9H4G0 881 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PELI2Q9HAT8 420 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 MRPS30Q9NP92 439 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 SEMA4GQ9NTN9 838 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TMEM184CQ9NVA4 438 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 FAM86C1Q9NVL1 165 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 NCDNQ9UBB6 729 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 EPHA6Q9UF33 1036 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TRPS1Q9UHF7 1281 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 SNX7Q9UNH6 387 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TIMM22Q9Y584 194 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 U3KQA8 63 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF318Q5VUA4 2279 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CACNA1EQ15878 2313 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 IGHV1OR21-1A0A087WYE8 117 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CPED1A4D0V7 1026 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 TMEM233B4DJY2 109 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PROB1E7EW31 1015 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 H0YIV9 168 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 HGSO14964 777 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 TNFSF14O43557 240 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SNX3O60493 162 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ULK1O75385 1050 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KRT6AP02538 564 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KRT6BP04259 564 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CKMT1AP12532 417 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CDH1P12830 882 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ALOX15P16050 662 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 UGT2B7P16662 529 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CD22P20273 847 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 VARSP26640 1264 aaKnown RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PSMB5P28074 263 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ARL1P40616 181 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 GRK6P43250 576 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KRT6CP48668 564 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 DUSP3P51452 185 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CCR8P51685 355 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CSNK1G2P78368 415 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 GPLD1P80108 840 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 RELAQ04206 551 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SQSTM1Q13501 440 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ZRSR2Q15696 482 aaKnown RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 HIST2H2ACQ16777 129 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SLC5A12Q1EHB4 618 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 INAVAQ3KP66 663 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PAGE2BQ5JRK9 111 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KIAA1614Q5VZ46 1190 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KANK2Q63ZY3 851 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CLEC6AQ6EIG7 209 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 HIST2H2AA3Q6FI13 130 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 GRHL2Q6ISB3 625 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 EPGNQ6UW88 154 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 FAM129CQ86XR2 697 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 FAM20CQ8IXL6 584 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms