RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 EIF3FO00303 357 aaPredicted RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 CEP104O60308 925 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 EIF2S1P05198 315 aaKnown RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 CYC1P08574 325 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 ANXA5P08758 320 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 ZGLP1P0C6A0 271 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 MYBL2P10244 700 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 ICAM2P13598 275 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 MCM3P25205 808 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 OR1D4P47884 311 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 PRDX1Q06830 199 aaKnown RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 KLC1Q07866 573 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 MFAP5Q13361 173 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 THOC5Q13769 683 aaKnown RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 ZNF169Q14929 603 aaPredicted RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 INAQ16352 499 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 NDUFA9Q16795 377 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 PRTGQ2VWP7 1150 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 RIPOR1Q6ZS17 1223 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 CUZD1Q86UP6 607 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 KBTBD2Q8IY47 623 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 KCNJ9Q92806 393 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 C19orf60Q96EN9 201 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 MKKSQ9NPJ1 570 aaPredicted RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 LZTFL1Q9NQ48 299 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 C3orf18Q9UK00 162 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
UPF3B-204ENST00000619445 CRYL1Q9Y2S2 319 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 NSG1A0A0A6YYJ2 146 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 DYTNA2CJ06 578 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 CTAGE9A4FU28 777 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 ARHGEF33A8MVX0 844 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 ZBTB14O43829 449 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 NIPSNAP2O75323 286 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 LDLRP01130 860 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 EDN3P14138 238 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 PSMB5P28074 263 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 PNLIPRP1P54315 467 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 CDC16Q13042 620 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 GPS1Q13098 491 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 DHX34Q14147 1143 aaKnown RBP11.36□□□□□ -0.59
UPF3B-204ENST00000619445 FAM53BQ14153 422 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 KCNJ11Q14654 390 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 KLHL38Q2WGJ6 581 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 ICE2Q659A1 982 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 ZNF470Q6ECI4 717 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 FRMPD2BQ6IN97 320 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 NDUFAF7Q7L592 441 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 MCUQ8NE86 351 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 THOC3Q96J01 351 aaKnown RBP11.36□□□□□ -0.59
UPF3B-204ENST00000619445 FAM129AQ9BZQ8 928 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 TGIF2Q9GZN2 237 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 RIC8BQ9NVN3 520 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 MAU2Q9Y6X3 613 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 CACNA1DQ01668 2161 aa11.36□□□□□ -0.59
UPF3B-204ENST00000619445 H0YGG7 62 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 SERPINA7P05543 415 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 MPC1LP0DKB6 136 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 KCNJ1P48048 391 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 EMP2P54851 167 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ARF3P61204 181 aaPredicted RBP11.35□□□□□ -0.59
UPF3B-204ENST00000619445 HIF1AQ16665 826 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 CCSMST1Q4G0I0 132 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ACSBG2Q5FVE4 666 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ATG9BQ674R7 924 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 UGT3A1Q6NUS8 523 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 FBXO42Q6P3S6 717 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 CES3Q6UWW8 571 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 CENPUQ71F23 418 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 PAQR7Q86WK9 346 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 BCORP1Q8N888 145 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 MCOLN3Q8TDD5 553 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 GRK7Q8WTQ7 553 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 FAR1Q8WVX9 515 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ASB11Q8WXH4 323 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 INPP5DQ92835 1189 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 PBKQ96KB5 322 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ACAT2Q9BWD1 397 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 DRC3Q9H069 523 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 PCBD2Q9H0N5 130 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 TRPC4Q9UBN4 977 aa11.35□□□□□ -0.59
UPF3B-204ENST00000619445 ERRFI1Q9UJM3 462 aaPredicted RBP11.35□□□□□ -0.59
UPF3B-204ENST00000619445 RUVBL2Q9Y230 463 aaKnown RBP11.35□□□□□ -0.59
UPF3B-204ENST00000619445 NBPF19A0A087WUL8 3843 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 LOC105369274A0A096LPK9 316 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 TRAV17A0A0B4J275 112 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 LOC102723532A0A0G2JNH3 316 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 IDSB3KWA1 339 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 GOLGA8KD6RF30 607 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 GOLGA8TH3BQL2 631 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 BMP10O95393 424 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 KRT14P02533 472 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 UQCRHP07919 91 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms