RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 PRLHRP49683 370 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 LIMK2P53671 638 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 GFERP55789 205 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 PPP1CAP62136 330 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 CRADDP78560 199 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ACVR1Q04771 509 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 CDH17Q12864 832 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 SRSF6Q13247 344 aaKnown RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ITGA9Q13797 1035 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 KIR2DS5Q14953 304 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 TRIP13Q15645 432 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 CYP1B1Q16678 543 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 MAP9Q49MG5 647 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 AGAP9Q5VTM2 703 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ANKRD22Q5VYY1 191 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 WASH2PQ6VEQ5 465 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 RAB11FIP2Q7L804 512 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ARHGAP22Q7Z5H3 698 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 SNX20Q7Z614 316 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 CLDN19Q8N6F1 224 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 WDR36Q8NI36 951 aaKnown RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 STYXQ8WUJ0 223 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 RSC1A1Q92681 617 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 GRAMD1AQ96CP6 724 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 LINC00615Q96LM1 132 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 RMDN2Q96LZ7 410 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ZNF578Q96N58 590 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 PPP1R2P1Q96PQ5 205 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 RANBP9Q96S59 729 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 OSBPL9Q96SU4 736 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 AP1M1Q9BXS5 423 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 SLC40A1Q9NP59 571 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 WASH6PQ9NQA3 447 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 OCIAD1Q9NX40 245 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 PAK5Q9P286 719 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 FEZ2Q9UHY8 353 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 TTC7AQ9ULT0 858 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 PSMD13Q9UNM6 376 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 JRKLQ9Y4A0 524 aa7.27□□□□□ -1.25
CBWD1-228ENST00000619157 CFAP20Q9Y6A4 193 aaKnown RBP7.27□□□□□ -1.25
CBWD1-228ENST00000619157 ATRXP46100 2492 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MGAT4DA6NG13 374 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 ERI2A8K979 691 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PDZK1P1A8MUH7 402 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PSMD3O43242 534 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 KIF1CO43896 1103 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 OR1I1O60431 355 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PRAMEF10O60809 474 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 AVILO75366 819 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 GOT2P00505 430 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 C9P02748 559 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 APRTP07741 180 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 ITGA2BP08514 1039 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MSH3P20585 1137 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MSNP26038 577 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PDHA2P29803 388 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PBLDP30039 288 aaPredicted RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 SLC5A2P31639 672 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 AKT1P31749 480 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 ACTN2P35609 894 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 HADHAP40939 763 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MAGEA6P43360 314 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TNNT3P45378 269 aaPredicted RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 LEPRP48357 1165 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TERF1P54274 439 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 ERVPABLB-1P60509 514 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TLE3Q04726 772 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 CCDC173Q0VFZ6 552 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 GPR18Q14330 331 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 KCNJ11Q14654 390 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TGIF1Q15583 401 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 RPE65Q16518 533 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 ZRANB3Q5FWF4 1079 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TSTD2Q5T7W7 516 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 METRNLQ641Q3 311 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TMEM71Q6P5X7 295 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 NAPRTQ6XQN6 538 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TMEM26Q6ZUK4 368 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 LINC00523Q86TU6 105 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 LDB1Q86U70 411 aaPredicted RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 SLC9B2Q86UD5 537 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 PIM3Q86V86 326 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 AMZ2Q86W34 360 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MPP5Q8N3R9 675 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 FBXO39Q8N4B4 442 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 BMPERQ8N8U9 685 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 CCDC89Q8N998 374 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 OR4D9Q8NGE8 314 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 OR2L2Q8NH16 312 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 LKAAEAR1Q8TD35 194 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 CPT1BQ92523 772 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 HDAC10Q969S8 669 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 FBXW5Q969U6 566 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 BBC3Q96PG8 261 aaPredicted RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 WWP1Q9H0M0 922 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 UCK1Q9HA47 277 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 EIF2B3Q9NR50 452 aaKnown RBP7.26□□□□□ -1.25
CBWD1-228ENST00000619157 CHRAC1Q9NRG0 131 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 TREX1Q9NSU2 369 aa7.26□□□□□ -1.25
CBWD1-228ENST00000619157 MARCH4Q9P2E8 410 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms