RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 NECTIN4Q96NY8 510 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 NUP85Q9BW27 656 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 THAP2Q9H0W7 228 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 RABEP2Q9H5N1 569 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 OPA3Q9H6K4 179 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.24□□□□□ -2.05
TARDBP-220ENST00000618606 P4HTMQ9NXG6 502 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 CPSF2Q9P2I0 782 aaKnown RBP2.24□□□□□ -2.05
TARDBP-220ENST00000618606 CACNG4Q9UBN1 327 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 MORF4L1Q9UBU8 362 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 ZNF510Q9Y2H8 683 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 CSNK1G3Q9Y6M4 447 aa2.24□□□□□ -2.05
TARDBP-220ENST00000618606 ZNF541Q9H0D2 1346 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 FAM170AA1A519 330 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GLOD5A6NK44 160 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 A8MXE2 369 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 CDRT15L2A8MXV6 281 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 SLC7A4O43246 635 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 PAPSS1O43252 624 aaPredicted RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GPRIN2O60269 458 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 IGHEP01854 428 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 MELTFP08582 738 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 THEGLP0DJG4 465 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 PON1P27169 355 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 MTHFRP42898 656 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 CAPZA2P47755 286 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 ZNF41P51814 821 aaPredicted RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 STAT2P52630 851 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GUCY2DQ02846 1103 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 AIMP2Q13155 320 aaKnown RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 PPP2R5CQ13362 524 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 EFTUD2Q15029 972 aaKnown RBP eCLIP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 FAM98BQ52LJ0 330 aaKnown RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 PHLDA2Q53GA4 152 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 IGSF11Q5DX21 431 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 KRBOX4Q5JUW0 171 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 SPDYCQ5MJ68 293 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 SLC10A5Q5PT55 438 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 DCLRE1AQ6PJP8 1040 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 CATSPERDQ86XM0 798 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 POGLUT1Q8NBL1 392 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 APPL2Q8NEU8 664 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GPRC5AQ8NFJ5 357 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 OR5M8Q8NGP6 311 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GOT1L1Q8NHS2 421 aaPredicted RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 ZNF577Q9BSK1 485 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 TEX12Q9BXU0 123 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 PPANQ9NQ55 473 aaKnown RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 GIMAP4Q9NUV9 329 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 OSER1Q9NX31 292 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 B3GAT1Q9P2W7 334 aa2.23□□□□□ -2.05
TARDBP-220ENST00000618606 SEC63Q9UGP8 760 aaKnown RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 ZNF107Q9UII5 783 aaPredicted RBP2.23□□□□□ -2.05
TARDBP-220ENST00000618606 A8MXK9 166 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 H0Y626 953 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 SPRY1O43609 319 aaPredicted RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 TADA2AO75478 443 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 SLCO2B1O94956 709 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 MYBL1P10243 752 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 SLC2A2P11168 524 aaPredicted RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 MMP9P14780 707 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 TRIM21P19474 475 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 PTMSP20962 102 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 LHCGRP22888 699 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 TSFMP43897 325 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 CD300CQ08708 224 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 IL11RAQ14626 422 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 COG2Q14746 738 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 HERC3Q15034 1050 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 C9orf152Q5JTZ5 239 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 TRAT1Q6PIZ9 186 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 GDPGP1Q6ZNW5 385 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 CEACAM19Q7Z692 300 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 RTN4RL2Q86UN3 420 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 ZFAND4Q86XD8 727 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 IQCA1Q86XH1 822 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 PHC2Q8IXK0 858 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 THNSL1Q8IYQ7 743 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 CEP57L1Q8IYX8 460 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 OR8H3Q8N146 312 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 METTL4Q8N3J2 472 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 NPEPL1Q8NDH3 523 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 ATP8B4Q8TF62 1192 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 CHPT1Q8WUD6 406 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 MRPS27Q92552 414 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 SECISBP2LQ93073 1101 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 RFT1Q96AA3 541 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 LRRC59Q96AG4 307 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 RMDN1Q96DB5 314 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 TMCO6Q96DC7 493 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 VMP1Q96GC9 406 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 PGAM5Q96HS1 289 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 SPATA17Q96L03 361 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 LINC00615Q96LM1 132 aaPredicted RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 FER1L6-AS2Q96M78 137 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 DGAT2Q96PD7 388 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 NKX3-1Q99801 234 aaPredicted RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 LMF2Q9BU23 707 aaKnown RBP2.22□□□□□ -2.05
TARDBP-220ENST00000618606 EDEM3Q9BZQ6 932 aa2.22□□□□□ -2.05
TARDBP-220ENST00000618606 HRH4Q9H3N8 390 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms