RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 LYPLAL1Q5VWZ2 237 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 TMEM53Q6P2H8 277 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 FAM9CQ8IZT9 166 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 DNASE1L2Q92874 299 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 PITX2Q99697 317 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 DCSTAMPQ9H295 470 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 REEP1Q9H902 201 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 ZBTB20Q9HC78 741 aaPredicted RBP19.79■□□□□ 0.76
NEK3-208ENST00000618534 KCTD5Q9NXV2 234 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 SLCO3A1Q9UIG8 710 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 ZNF229Q9UJW7 825 aa19.79■□□□□ 0.76
NEK3-208ENST00000618534 KRT87PA6NCN2 255 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 CLDN24A6NM45 220 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 AMD1P17707 334 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 GSSP48637 474 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ALDH7A1P49419 539 aaKnown RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 NPRL3Q12980 569 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 PLEKHG6Q3KR16 790 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 PDE12Q6L8Q7 609 aaKnown RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 FAHD1Q6P587 224 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ZNF783Q6ZMS7 281 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ZNF621Q6ZSS3 439 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 TSPAN33Q86UF1 283 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ENTHD1Q8IYW4 607 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 PGBD3Q8N328 593 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 IPCEF1Q8WWN9 437 aaPredicted RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 PRDM8Q9NQV8 689 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ERVK-11Q9UQG0 969 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 MRPS14O60783 128 aaKnown RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 HMGA1P17096 107 aaKnown RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 PRPH2P23942 346 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 SPAM1P38567 509 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 LIPAP38571 399 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ITGA1P56199 1179 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 BCL2L1Q07817 233 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 MTAPQ13126 283 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 SLC13A2Q13183 592 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 CAMK2GQ13555 558 aaPredicted RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 GGTA1PQ4G0N0 100 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 PRSS36Q5K4E3 855 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 NOXRED1Q6NXP6 359 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ANKS3Q6ZW76 656 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 CBLL1Q75N03 491 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 EIF3MQ7L2H7 374 aaKnown RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 LRRC70Q7Z2Q7 622 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 FBXO22Q8NEZ5 403 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 BCL7CQ8WUZ0 217 aaPredicted RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 SYT17Q9BSW7 474 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 TTPALQ9BTX7 342 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 KLF16Q9BXK1 252 aaPredicted RBP19.78■□□□□ 0.76
NEK3-208ENST00000618534 ITPAQ9BY32 194 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 ABCB10Q9NRK6 738 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 VPS4AQ9UN37 437 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 MICAL3Q7RTP6 2002 aa19.78■□□□□ 0.76
NEK3-208ENST00000618534 PRAMEF4O60810 478 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 EPN2O95208 641 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CCR7P32248 378 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 PPP3CCP48454 512 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 TRPC1P48995 793 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 BOP1Q14137 746 aaKnown RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 UGT8Q16880 541 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 UBE2UQ5VVX9 321 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 PRAMEF9Q5VWM5 478 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 NEK5Q6P3R8 708 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 Q6ZPB1 254 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 MSANTD1Q6ZTZ1 278 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 NEK10Q6ZWH5 1172 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 UBE2R2Q712K3 238 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 SLC38A4Q969I6 547 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 TPD52L3Q96J77 140 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CASD1Q96PB1 797 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 KIAA1522Q9P206 1035 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 ANKMY1Q9P2S6 941 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.77■□□□□ 0.76
NEK3-208ENST00000618534 TMED5Q9Y3A6 229 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 MANSC4A6NHS7 340 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 MYO1DO94832 1006 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CPSF4O95639 269 aaKnown RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 GPX2P18283 190 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CLK1P49759 484 aaKnown RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 ZNF157P51786 506 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 WNT3P56703 355 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CRHR2Q13324 411 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CST9Q5W186 159 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 IFNL1Q8IU54 200 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 ARMC8Q8IUR7 673 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 CLECL1Q8IZS7 167 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 GPR26Q8NDV2 337 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 SKA2Q8WVK7 121 aaPredicted RBP19.77■□□□□ 0.76
NEK3-208ENST00000618534 TRPM5Q9NZQ8 1165 aa19.77■□□□□ 0.76
NEK3-208ENST00000618534 MAGEB17A8MXT2 336 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 FLT3LGP49771 235 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 PTCHD3Q3KNS1 767 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 GPR33Q49SQ1 333 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 ERICH5Q6P6B1 374 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 TPGS1Q6ZTW0 290 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 ZSWIM9Q86XI8 627 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 SYT12Q8IV01 421 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 OVCA2Q8WZ82 227 aa19.76■□□□□ 0.75
NEK3-208ENST00000618534 ALG14Q96F25 216 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms