RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 NUMA1Q14980 2115 aa11.75□□□□□ -0.53
SRRT-216ENST00000618262 HELZP42694 1942 aaKnown RBP11.75□□□□□ -0.53
SRRT-216ENST00000618262 A8MUA0 341 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 FKBP6O75344 327 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 PAPLNO95428 1278 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 DLDP09622 509 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 ALPIP09923 528 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 ST8SIA6P61647 398 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 IFI35P80217 286 aaPredicted RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 DSG2Q14126 1118 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 MPP7Q5T2T1 576 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 DHDDSQ86SQ9 333 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 DCAF4L2Q8NA75 395 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 FICDQ9BVA6 458 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 TEX12Q9BXU0 123 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 RIC8BQ9NVN3 520 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 NEU2Q9Y3R4 380 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 MIA3Q5JRA6 1907 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 KPNA3O00505 521 aaPredicted RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 ULK1O75385 1050 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 APODP05090 189 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.534e-9■■■■■ 33.4
SRRT-216ENST00000618262 ODF1Q14990 250 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 TRMT5Q32P41 509 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 FSTL4Q6MZW2 842 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 PRPF39Q86UA1 669 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ZNF398Q8TD17 642 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 EXT2Q93063 718 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 LMLNQ96KR4 655 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 C9orf72Q96LT7 481 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 SMAD5Q99717 465 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 COPS4Q9BT78 406 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 PITPNM3Q9BZ71 974 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ZFP57Q9NU63 452 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 ZFP69BQ9UJL9 534 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 PLCL2Q9UPR0 1127 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 EIF3LQ9Y262 564 aaKnown RBP11.74□□□□□ -0.53
SRRT-216ENST00000618262 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
SRRT-216ENST00000618262 LOC730098B7Z3J9 87 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 GMDSO60547 372 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 CIB2O75838 187 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 DHFRP00374 187 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 CD63P08962 238 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 ALDH3B2P48448 385 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 ATP12AP54707 1039 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 STX5Q13190 355 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 PGS1Q32NB8 556 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 FNBP1LQ5T0N5 605 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 RSBN1Q5VWQ0 802 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 FKBP9P1Q75LS8 142 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 MYO19Q96H55 970 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 SAV1Q9H4B6 383 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 GLOD4Q9HC38 313 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 HSBP1L1C9JCN9 74 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 MFN2O95140 757 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 KLF8O95600 359 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 PROCP04070 461 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 HBQ1P09105 142 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 BMP2P12643 396 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 IVDP26440 423 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 NNMTP40261 264 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 P2RY4P51582 365 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 TOR2AQ5JU69 321 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 CERCAMQ5T4B2 595 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 TIGD7Q6NT04 549 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 BLOC1S5Q8TDH9 187 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 MYDGFQ969H8 173 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 TESCQ96BS2 214 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 ISOC1Q96CN7 298 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 MRGPRX3Q96LB0 322 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 TM9SF3Q9HD45 589 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 BPIFA1Q9NP55 256 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 OBP2AQ9NY56 170 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 GRHL1Q9NZI5 618 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 PSME2Q9UL46 239 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 DRG1Q9Y295 367 aaKnown RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
SRRT-216ENST00000618262 LEFTY1O75610 366 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 NUDT17P0C025 328 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 FAM58BPP0C7Q3 252 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 SRFP11831 508 aa11.73□□□□□ -0.53
SRRT-216ENST00000618262 CNTFP26441 200 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms