RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MEF2AQ02078 507 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ACSM2AQ08AH3 577 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 TMEM259Q4ZIN3 620 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ACSM2BQ68CK6 577 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 CHST15Q7LFX5 561 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 DCUN1D3Q8IWE4 304 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 CDC26Q8NHZ8 85 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 RAD51AP1Q96B01 352 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 TESCQ96BS2 214 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 UHRF1Q96T88 793 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 MYOCQ99972 504 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC17A9Q9BYT1 436 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 PHPT1Q9NRX4 125 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ARMC1Q9NVT9 282 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 AK5Q9Y6K8 562 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 PIAS3Q9Y6X2 628 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 LATO43561 262 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 CAPNS1P04632 268 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 C1GALT1C1LP0DN25 315 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 HSD3B1P14060 373 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 UQCRBP14927 111 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 KELP23276 732 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 HSD3B2P26439 372 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPS13P62277 151 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 MTX3Q5HYI7 312 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBCELQ5QJ74 424 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 ATG9BQ674R7 924 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 ADGRG5Q8IZF4 528 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 C1orf52Q8N6N3 182 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 CATSPER1Q8NEC5 780 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC5A11Q8WWX8 675 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 FAM131CQ96AQ9 280 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 PPWD1Q96BP3 646 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 NECTIN4Q96NY8 510 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 INPP5KQ9BT40 448 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 PAIP1Q9H074 479 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 SPNS1Q9H2V7 528 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 SERHLQ9NQF3 203 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 RUVBL1Q9Y265 456 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 DNMT3AQ9Y6K1 912 aaPredicted RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 TCRBV5S2A0A599 114 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 ACP5P13686 325 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 PSMA4P25789 261 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 TEAD1P28347 426 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 IGFALSP35858 605 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 CYP4F3Q08477 520 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 BLMHQ13867 455 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 FXNQ16595 210 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 CYP51A1Q16850 503 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 IER5LQ5T953 404 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 KIAA1161Q6NSJ0 714 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 DUS1LQ6P1R4 473 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 FAM124AQ86V42 546 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 GALNT4Q8N4A0 578 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 GPR156Q8NFN8 814 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR7A2PQ8NGA2 310 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 WDR34Q96EX3 536 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 ZNF583Q96ND8 569 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 THUMPD3Q9BV44 507 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPF2Q9H7B2 306 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 PCDHB3Q9Y5E6 796 aa16.74■□□□□ 0.27
PCDHGC3-205ENST00000617641 PCM1Q15154 2024 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3DA0A087WVF3 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3IA0A087WXS9 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3EA0A087X179 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3KA0A087X1G2 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PIPSLA2A3N6 862 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3FA6NER0 549 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3LB9A6J9 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 H3BQ06 376 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3HP0C7X1 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 MYCLP1P12525 358 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 CLCNKAP51800 687 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 RAE1P78406 368 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PRAMEF14Q5SWL7 426 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PRAMEF13Q5VWM6 474 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3GQ6DHY5 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR4F3Q6IEY1 312 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3CQ6IPX1 549 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 NXPE4Q6UWF7 544 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBC1D3Q8IZP1 549 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 DTWD1Q8N5C7 304 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR5K2Q8NHB8 316 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 EME1Q96AY2 570 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 HHIPQ96QV1 700 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 EFCAB11Q9BUY7 163 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 ACAT2Q9BWD1 397 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 COL4A2P08572 1712 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TRBV5-3A0A0A0MS03 114 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TXNDC9O14530 226 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PI15O43692 258 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 TPST1O60507 370 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 GSNP06396 782 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC35G4P0C7Q5 338 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PRPS1L1P21108 318 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms