RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 DKK1O94907 266 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 JUPP14923 745 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 IL9P15248 144 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 DRD1P21728 446 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PNLIPRP1P54315 467 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 NAA20P61599 178 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 RPS13P62277 151 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 AP2B1P63010 937 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 USP39Q53GS9 565 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 NANOGP8Q6NSW7 305 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 LRRC74BQ6ZQY2 392 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 KBTBD6Q86V97 674 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SPPL2CQ8IUH8 684 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 OR56A3Q8NH54 315 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SH3KBP1Q96B97 665 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ZNF514Q96K75 400 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 LINC00615Q96LM1 132 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 MACROD1Q9BQ69 325 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SEMA6AQ9H2E6 1030 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 OR51B5Q9H339 312 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 NANOGQ9H9S0 305 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 NMRK1Q9NWW6 199 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 TAC3Q9UHF0 121 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PRPF19Q9UMS4 504 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 EIF3LQ9Y262 564 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 KLHL20Q9Y2M5 609 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 KCNE2Q9Y6J6 123 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ABCA7Q8IZY2 2146 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 C17orf113A0A1B0GUU1 675 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 KANSL1LA0AUZ9 987 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 DFNA5O60443 496 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CDH1P12830 882 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SDC1P18827 310 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 HNF4AP41235 474 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 SLBPQ14493 270 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEK3-207ENST00000617054 PDCD4Q53EL6 469 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 CAPN13Q6MZZ7 669 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 SLCO4C1Q6ZQN7 724 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ZFAND4Q86XD8 727 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PHACTR4Q8IZ21 702 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CLEC4FQ8N1N0 589 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PLPP7Q8NBV4 271 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 OR7A2PQ8NGA2 310 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 WDR20Q8TBZ3 569 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 BMFQ96LC9 184 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 HHIPQ96QV1 700 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 IKZF5Q9H5V7 419 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 C6orf106Q9H6K1 298 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 PFDN4Q9NQP4 134 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PHPT1Q9NRX4 125 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 VAPAQ9P0L0 249 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CD300AQ9UGN4 299 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PCDHGA4Q9Y5G9 962 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 FAM234BA2RU67 622 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 H7BY64 318 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 TRIM38O00635 465 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 MT-ND1P03886 318 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 SLC35G4P0C7Q5 338 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 MYCLP1P12525 358 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 HOXB3P14651 431 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 AMD1P17707 334 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 GRIA3P42263 894 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 MAP7D1Q3KQU3 841 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 CACHD1Q5VU97 1274 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 NOXRED1Q6NXP6 359 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 C8orf82Q6P1X6 216 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 SLC30A9Q6PML9 568 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 LRRC56Q8IYG6 542 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 LINC01555Q8NAE3 123 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 ATL1Q8WXF7 558 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PRAP1Q96NZ9 151 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 UHRF1Q96T88 793 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 GPATCH1Q9BRR8 931 aaKnown RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 INPP5KQ9BT40 448 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PPT2Q9UMR5 302 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 NCKAP1Q9Y2A7 1128 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 C15orf41Q9Y2V0 281 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 SNRNP200O75643 2136 aaKnown RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 KMOO15229 486 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 TPST1O60507 370 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PGRP06401 933 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PEX2P28328 305 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 CASP9P55211 416 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 GAS6Q14393 721 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 KRT33BQ14525 404 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 COL19A1Q14993 1142 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 RBBP5Q15291 538 aaKnown RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 MUM1Q2TAK8 710 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PYCR3Q53H96 274 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 CDKL4Q5MAI5 379 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 ISLR2Q6UXK2 745 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 DLEU7Q6UYE1 221 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 GALNT13Q8IUC8 556 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 LILRA2Q8N149 483 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 C10orf111Q8N326 155 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 C1orf52Q8N6N3 182 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms