RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 EGLN2Q96KS0 407 aa15.21■□□□□ 0.03
NR1H3-235ENST00000616973 YIPF3Q9GZM5 350 aa15.21■□□□□ 0.03
NR1H3-235ENST00000616973 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 MGAT4DA6NG13 374 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 PDLIM1O00151 329 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 CXCR6O00574 342 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 CLOCKO15516 846 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 KIF1CO43896 1103 aaKnown RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 MYO1DO94832 1006 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 KAT7O95251 611 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 EPHX1P07099 455 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 IL1RNP18510 177 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 RPL5P46777 297 aaKnown RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 ABHD18Q0P651 414 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 CNTN1Q12860 1018 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 PIP5KL1Q5T9C9 394 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 MED27Q6P2C8 311 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 TMEM184AQ6ZMB5 413 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 OR8J2Q8NGG1 315 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 FAM120BQ96EK7 910 aaKnown RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 MTERF1Q99551 399 aaKnown RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 INPP5KQ9BT40 448 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 EHD1Q9H4M9 534 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 PNPLA3Q9NST1 481 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 FAM120CQ9NX05 1096 aaKnown RBP15.21■□□□□ 0.02
NR1H3-235ENST00000616973 ADGRE2Q9UHX3 823 aa15.21■□□□□ 0.02
NR1H3-235ENST00000616973 TRPM6Q9BX84 2022 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 SMIM31A0A1B0GVY4 71 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 RFXANKO14593 260 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 DEAF1O75398 565 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-235ENST00000616973 CLPTM1O96005 669 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 NPPBP16860 134 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 ASMTP46597 345 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 TBPL1P62380 186 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 RPA4Q13156 261 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 ENPP2Q13822 863 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 ADRM1Q16186 407 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 UGT8Q16880 541 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 DUOXA1Q1HG43 343 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 OR4F3Q6IEY1 312 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 IYDQ6PHW0 289 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 GCNT7Q6ZNI0 430 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 C11orf96Q7Z7L8 435 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 LRRC56Q8IYG6 542 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-235ENST00000616973 CHTF18Q8WVB6 975 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 FIG4Q92562 907 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 NEIL2Q969S2 332 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 EBPLQ9BY08 206 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 CD320Q9NPF0 282 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 OLAHQ9NV23 265 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 SIRT5Q9NXA8 310 aa15.2■□□□□ 0.02
NR1H3-235ENST00000616973 MAGEB17A8MXT2 336 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SCN2BO60939 215 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 LRATO95237 230 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 TFAP2AP05549 437 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 MYF6P23409 242 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 RAE1P78406 368 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 MERTKQ12866 999 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SHHQ15465 462 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SLC36A3Q495N2 470 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SPIN4Q56A73 249 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 EGFLAMQ63HQ2 1017 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 YAF2Q8IY57 180 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 LAS2Q8IYD9 372 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SYTL1Q8IYJ3 562 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 HUS1BQ8NHY5 278 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 SETD7Q8WTS6 366 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 REXO5Q96IC2 774 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PRPF18Q99633 342 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 EFCAB11Q9BUY7 163 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 ADI1Q9BV57 179 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 ZDHHC5Q9C0B5 715 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 REXO4Q9GZR2 422 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 MCOLN1Q9GZU1 580 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 OR52A5Q9H2C5 316 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 MAGIXQ9H6Y5 334 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 NTN4Q9HB63 628 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 DYRK1BQ9Y463 629 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 FOXE1O00358 373 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 EI24O14681 340 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 C1GALT1C1LP0DN25 315 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PBX2P40425 430 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 CDKN2CP42773 168 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 WNT3P56703 355 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 DDX39BQ13838 428 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PYCR3Q53H96 274 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 KRT80Q6KB66 452 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PNCKQ6P2M8 343 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 TRMT11Q7Z4G4 463 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 CAMKMTQ7Z624 323 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 ANKRD46Q86W74 232 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PHACTR4Q8IZ21 702 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 CHFRQ96EP1 664 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 TBCDQ9BTW9 1192 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 PLA2G2FQ9BZM2 168 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 DCAF13Q9NV06 445 aaKnown RBP15.19■□□□□ 0.02
NR1H3-235ENST00000616973 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
NR1H3-235ENST00000616973 CIDEBQ9UHD4 219 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms