RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 OR5T3Q8NGG3 340 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 UBXN4Q92575 508 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NEIL2Q969S2 332 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 GBP5Q96PP8 586 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 TAS2R13Q9NYV9 303 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NDOR1Q9UHB4 597 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SLC22A14Q9Y267 594 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 PCDHB11Q9Y5F2 797 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 UBR5O95071 2799 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ARHGAP10A1A4S6 786 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CDC14CA4D256 554 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 TAPBPO15533 448 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 VPS26AO75436 327 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF189O75820 626 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SHBGP04278 402 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SLC35E2BP0CK96 405 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CCDC166P0CW27 439 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CDH1P12830 882 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NPPBP16860 134 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CYP2A7P20853 494 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NDUFS1P28331 727 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NFATC3Q12968 1075 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 IL11RAQ14626 422 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SLMAPQ14BN4 828 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 TMED2Q15363 201 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CYP2A13Q16696 494 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 RNF187Q5TA31 235 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 THEMIS2Q5TEJ8 643 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 AGTRAPQ6RW13 159 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 UNC5DQ6UXZ4 953 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 SYDE1Q6ZW31 735 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 VN1R4Q7Z5H5 301 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 DSELQ8IZU8 1212 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 TRIM44Q96DX7 344 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 DPH1Q9BZG8 443 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 RNF14Q9UBS8 474 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 PADI1Q9ULC6 663 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 RUVBL1Q9Y265 456 aaKnown RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 PPP6CO00743 305 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ZSCAN9O15535 394 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CDC123O75794 336 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ALDOAP04075 364 aaKnown RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 UMODP07911 640 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 BCL6P41182 706 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 RAB15P59190 212 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 DNASE1L3Q13609 305 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 TAF1BQ53T94 588 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ICE2Q659A1 982 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 UGT3A1Q6NUS8 523 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 LRRC6Q86X45 466 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 PDSS2Q86YH6 399 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 CENPLQ8N0S6 344 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF843Q8N446 348 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 MMGT1Q8N4V1 131 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 KCTD4Q8WVF5 259 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 NXNL1Q96CM4 212 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 OR2A5Q96R48 311 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 KLHL31Q9H511 634 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 ARL15Q9NXU5 204 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 POLG2Q9UHN1 485 aa5.45□□□□□ -1.54
CPNE3-208ENST00000614678 A0A0A6YYC8 382 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 IGHV3-20A0A0C4DH32 117 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 I3L1I5 382 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 QSOX1O00391 747 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TOX3O15405 576 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TTC4O95801 387 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TBX6O95947 436 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 F10P00742 488 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 IL1RNP18510 177 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 EPORP19235 508 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CD22P20273 847 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 GCGRP47871 477 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 USP10Q14694 798 aaKnown RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 KLHL35Q6PF15 583 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 PAQR7Q86WK9 346 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 AMER3Q8N944 861 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ANKRD53Q8N9V6 530 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ZCCHC10Q8TBK6 192 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ABHD17AQ96GS6 310 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 RBBP8Q99708 897 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TMEM79Q9BSE2 394 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 EPB41L1Q9H4G0 881 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ALG9Q9H6U8 611 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 GPAMQ9HCL2 828 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 MRPS30Q9NP92 439 aaKnown RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 OR2A25A4D2G3 310 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ARGFXA6NJG6 315 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 E7EQ34 232 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 POC1B-GALNT4F8VUJ3 575 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TMX2-CTNND1H3BSU7 103 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 GOLGA8RI6L899 631 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 AP3B1O00203 1094 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 FOXS1O43638 330 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CTAGE8P0CG41 777 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TSPAN8P19075 237 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 PPARGP37231 505 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 KIR2DS3Q14952 304 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 WHAMMP3Q1A5X7 153 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms