RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CKMT2P17540 419 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 NELFEP18615 380 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 OXTRP30559 389 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 EIF2DP41214 584 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 VASPP50552 380 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 ATP4BP51164 291 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PNLIPRP1P54315 467 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 RPS21P63220 83 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 SP140Q13342 867 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CLCA4Q14CN2 919 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CYP51A1Q16850 503 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PDCD4Q53EL6 469 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 USP39Q53GS9 565 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 MTX3Q5HYI7 312 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 WLSQ5T9L3 541 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ANGPTL8Q6UXH0 198 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TRIM46Q7Z4K8 759 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CLECL1Q8IZS7 167 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PQLC1Q8N2U9 271 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 C10orf111Q8N326 155 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TCAIMQ8N3R3 496 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TP53I13Q8NBR0 393 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 HM13Q8TCT9 377 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 UBTD2Q8WUN7 234 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SLC13A3Q8WWT9 602 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FAM3CQ92520 227 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TMEM125Q96AQ2 219 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MIEF2Q96C03 454 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PDXPQ96GD0 296 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 COX14Q96I36 57 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 APOOQ9BUR5 198 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR52A5Q9H2C5 316 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ALG2Q9H553 416 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 KLHL42Q9P2K6 505 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 VPS29Q9UBQ0 182 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CD300AQ9UGN4 299 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PPT2Q9UMR5 302 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CYP8B1Q9UNU6 501 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 DYRK1BQ9Y463 629 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SLCO1B1Q9Y6L6 691 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SAC3D1A6NKF1 404 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 WASHC1A8K0Z3 465 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PDLIM1O00151 329 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SOX1O00570 391 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 ARPC2O15144 300 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SLC16A5O15375 505 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PEX1O43933 1283 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ANXA4P09525 319 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 LAMP1P11279 417 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 COX7A2P14406 83 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HOXB3P14651 431 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 AMD1P17707 334 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MAOBP27338 520 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ACADLP28330 430 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 S100A3P33764 101 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PTGER1P34995 402 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TNFRSF4P43489 277 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 TPMTP51580 245 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CDKL1Q00532 357 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 C1orf61Q13536 156 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 BCL7AQ4VC05 210 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 MED27Q6P2C8 311 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 DLEU7Q6UYE1 221 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 WASH2PQ6VEQ5 465 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SLCO4C1Q6ZQN7 724 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZNF621Q6ZSS3 439 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZNF765Q7L2R6 523 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 DGLUCYQ7Z3D6 616 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HORMAD1Q86X24 394 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZNF761Q86XN6 746 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 GALNT13Q8IUC8 556 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HID1Q8IV36 788 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 L3MBTL4Q8NA19 623 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR4E2Q8NGC2 313 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR4K1Q8NGD4 311 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 OR56A3Q8NH54 315 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 WDR48Q8TAF3 677 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 FBXO30Q8TB52 745 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 PATE1Q8WXA2 126 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 ATL1Q8WXF7 558 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 RAD51AP1Q96B01 352 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HHIPQ96QV1 700 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CGREF1Q99674 301 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CIB1Q99828 191 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 HOPXQ9BPY8 73 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 GPATCH1Q9BRR8 931 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 TMEM168Q9H0V1 697 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 CCDC177Q9NQR7 707 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 GEMIN8Q9NWZ8 242 aaKnown RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 ZIM2Q9NZV7 527 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 SCHIP1Q9P0W5 487 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 C5AR2Q9P296 337 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 NFKBIL1Q9UBC1 381 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 PNMA8BQ9ULN7 279 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 GPR34Q9UPC5 381 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 COLQQ9Y215 455 aaPredicted RBP3.32□□□□□ -1.88
LIG4-205ENST00000614526 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
LIG4-205ENST00000614526 AP4S1Q9Y587 144 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms