RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 FSHRP23945 695 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 MC4RP32245 332 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 RAVER1Q8IY67 606 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 CPNE9Q8IYJ1 553 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ZBTB2Q8N680 514 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 OR5H6Q8NGV6 325 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 DENND1AQ8TEH3 1009 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 PIGKQ92643 395 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 AZIN2Q96A70 460 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 FUBP3Q96I24 572 aaKnown RBP eCLIP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 RGCCQ9H4X1 137 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SMOXQ9NWM0 555 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 MARK1Q9P0L2 795 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SHPRHQ149N8 1683 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TLR5O60602 858 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TMEM63AO94886 807 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SRPRAP08240 638 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ELFN1P0C7U0 828 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 GSTM3P21266 225 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 PRKCHP24723 683 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 EIF2DP41214 584 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 CXCR3P49682 368 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 COL28A1Q2UY09 1125 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ESCO2Q56NI9 601 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ATXN7L2Q5T6C5 722 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TMEM198Q66K66 360 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 CARM1Q86X55 608 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 Q8N402 240 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TBC1D15Q8TC07 691 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SNX33Q8WV41 574 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ZNF471Q9BX82 626 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SOHLH2Q9NX45 425 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 KCNIP3Q9Y2W7 256 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 EXOSC1Q9Y3B2 195 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TMEM221A6NGB7 291 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 FANCGO15287 622 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ALX3O95076 343 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 LRATO95237 230 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 DCKP27707 260 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 RFC2P35250 354 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 RGS6P49758 472 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 HERVK_113P63132 956 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 IL10RBQ08334 325 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 GRB14Q14449 540 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 PUS10Q3MIT2 529 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TPGS2Q68CL5 300 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 DOK6Q6PKX4 331 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 LBX2Q6XYB7 198 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 DEFB132Q7Z7B7 95 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 PHYKPLQ8IUZ5 450 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 CADM2Q8N3J6 435 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 WDSUB1Q8N9V3 476 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 CCDC120Q96HB5 630 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ALPK1Q96QP1 1244 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TWNKQ96RR1 684 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ERVK-6Q9BXR3 956 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 BCL2L14Q9BZR8 327 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SLC25A51Q9H1U9 297 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 SIX2Q9NPC8 291 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 ZNF282Q9UDV7 671 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 MRPS17Q9Y2R5 130 aaKnown RBP6.71□□□□□ -1.34
CLCN3-211ENST00000613795 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 PCDHGB7Q9Y5F8 929 aa6.71□□□□□ -1.34
CLCN3-211ENST00000613795 NPEPPSL1A6NEC2 478 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 C9IYK1 514 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 IRAK2O43187 625 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 PAGE1O75459 146 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 CNTN5O94779 1100 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 THEGLP0DJG4 465 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 PBX3P40426 434 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 NIPAL4Q0D2K0 466 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 HNRNPA0Q13151 305 aaKnown RBP6.7□□□□□ -1.34
CLCN3-211ENST00000613795 PPP1R26Q5T8A7 1209 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-211ENST00000613795 C17orf64Q86WR6 236 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 OR52J3Q8NH60 311 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 JOSD2Q8TAC2 188 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 SGCDQ92629 289 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 CSPG4P5Q96PW8 444 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 BEX2Q9BXY8 128 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 TFB2MQ9H5Q4 396 aaKnown RBP6.7□□□□□ -1.34
CLCN3-211ENST00000613795 TCF7L1Q9HCS4 588 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 IFT46Q9NQC8 304 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 CDH7Q9ULB5 785 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 GLYATL1P3A0A0U1RQE8 302 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 ANXA2P2A6NMY6 339 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 GMFGO60234 142 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 BCAS1O75363 584 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-211ENST00000613795 CLDN9O95484 217 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 CXCL14O95715 111 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 NUDT14O95848 222 aa6.7□□□□□ -1.34
CLCN3-211ENST00000613795 HMGN1P05114 100 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms