RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 HSH2DQ96JZ2 352 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 BARHL1Q9BZE3 327 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 C3orf14Q9HBI5 128 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 SARS2Q9NP81 518 aaKnown RBP16.1■□□□□ 0.17
TSKU-205ENST00000612930 PRDM5Q9NQX1 630 aaPredicted RBP16.1■□□□□ 0.17
TSKU-205ENST00000612930 ZNF451Q9Y4E5 1061 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 TTC3P53804 2025 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 RGS5O15539 181 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 C9P02748 559 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 CD72P21854 359 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 ADCYAP1R1P41586 468 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 ITGA1P56199 1179 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 FCHO2Q0JRZ9 810 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 VGLL4Q14135 290 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 TSTQ16762 297 aaKnown RBP16.1■□□□□ 0.17
TSKU-205ENST00000612930 IQCCQ4KMZ1 466 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 AFTPHQ6ULP2 937 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 SCD5Q86SK9 330 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 RGL4Q8IZJ4 473 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 CACTIN-AS1Q8N1I8 211 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 SMIM14Q96QK8 99 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 SRRQ9GZT4 340 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 LRTM1Q9HBL6 345 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 DYRK4Q9NR20 520 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 ZNF226Q9NYT6 803 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
TSKU-205ENST00000612930 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 IQCF5A8MTL0 148 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 POLR1CO15160 346 aaPredicted RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 GPX5O75715 221 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 BCKDHAP12694 445 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 DPEP1P16444 411 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 CDONQ4KMG0 1287 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 INO80DQ53TQ3 878 aaPredicted RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 ZFAND1Q8TCF1 268 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 COQ8BQ96D53 544 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 COQ7Q99807 217 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 ATP13A2Q9NQ11 1180 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 TIGARQ9NQ88 270 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 GPRC5BQ9NZH0 403 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 NUP214P35658 2090 aaPredicted RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 HAS3O00219 553 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 APBA3O96018 575 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 RHOQP17081 205 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 M6PRP20645 277 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 KDELR2P33947 212 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 HSPA7P48741 367 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 PRIM2P49643 509 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 AFF1P51825 1210 aaKnown RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 TTLL9Q3SXZ7 439 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 SLC39A12Q504Y0 691 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 TOR1AIP1Q5JTV8 583 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 DNAJB8Q8NHS0 232 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 TMEM248Q9NWD8 314 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 KCNN3Q9UGI6 736 aa16.09■□□□□ 0.17
TSKU-205ENST00000612930 TNPO3Q9Y5L0 923 aaKnown RBP16.09■□□□□ 0.17
TSKU-205ENST00000612930 A0A1W2PQ72 361 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 OR6C70A6NIJ9 312 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 MEN1O00255 615 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 SLC28A1O00337 649 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
TSKU-205ENST00000612930 EPOP01588 193 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 GABRB1P18505 474 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 RPS12P25398 132 aaKnown RBP16.08■□□□□ 0.16
TSKU-205ENST00000612930 S100A3P33764 101 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 OLR1P78380 273 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 FAPQ12884 760 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.16
TSKU-205ENST00000612930 SYCE2Q6PIF2 218 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 SBSNQ6UWP8 590 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 FAM124AQ86V42 546 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 LAX1Q8IWV1 398 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 MDGA1Q8NFP4 955 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 OR4M1Q8NGD0 313 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 BHMTQ93088 406 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 CRELD1Q96HD1 420 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 TRIB3Q96RU7 358 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
TSKU-205ENST00000612930 ABCB8Q9NUT2 735 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 TMEM184CQ9NVA4 438 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 ELOVL2Q9NXB9 296 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 ASIC5Q9NY37 505 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 VPS4AQ9UN37 437 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 B4DXG7 233 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 TAPBPO15533 448 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 ESR1P03372 595 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 CBLP22681 906 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 RPS19P39019 145 aaKnown RBP16.08■□□□□ 0.16
TSKU-205ENST00000612930 PBX3P40426 434 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 NKX3-2P78367 333 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 SSX1Q16384 188 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 OR4F3Q6IEY1 312 aa16.08■□□□□ 0.16
TSKU-205ENST00000612930 PDE12Q6L8Q7 609 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms