RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZDHHC2Q9UIJ5 367 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CDYLQ9Y232 598 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 C15orf41Q9Y2V0 281 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 DHRS7Q9Y394 339 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PCM1Q15154 2024 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 AHCTF1Q8WYP5 2266 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 EIF3FO00303 357 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SLC22A2O15244 555 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MAP3K7O43318 606 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ZBTB14O43829 449 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 VPS26AO75436 327 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 THRAP10827 490 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CSF2RBP32927 897 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MAPK9P45984 424 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CAPZBP47756 277 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CLCN7P51798 805 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CDKN2DP55273 166 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TIAL1Q01085 375 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CFHR1Q03591 330 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GBX1Q14549 363 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ACSBG2Q5FVE4 666 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 FAM45BPQ6NSW5 357 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TLDC1Q6P9B6 456 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 UNC5DQ6UXZ4 953 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF574Q6ZN55 896 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 NEK10Q6ZWH5 1172 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 NET1Q7Z628 596 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 B3GNT8Q7Z7M8 397 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 VRK3Q8IV63 474 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SLITRK4Q8IW52 837 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CPSF7Q8N684 471 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 PHC3Q8NDX5 983 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 OR5K2Q8NHB8 316 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 FAM45AQ8TCE6 357 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 WDR60Q8WVS4 1066 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MOCOSQ96EN8 888 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 OR52B2Q96RD2 323 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC28BQ9BUN5 200 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF385DQ9H6B1 395 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 POPDC3Q9HBV1 291 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TCF7L2Q9NQB0 619 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TAS2R13Q9NYV9 303 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MCM8Q9UJA3 840 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MED16Q9Y2X0 877 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 APC2O95996 2303 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 A0A088AWK7 358 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC187A0A096LP49 1063 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 IGHV5-10-1A0A0J9YXX1 117 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TRABD2BA6NFA1 517 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 IPO13O94829 963 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 C9P02748 559 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC166P0CW27 439 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CBSLP0DN79 551 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ENO3P13929 434 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TYRP1P17643 537 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 FDXRP22570 491 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ADSLP30566 484 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CBSP35520 551 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CCR10P46092 362 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GTF2A1P52655 376 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 BTKQ06187 659 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GALNT1Q10472 559 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ABRQ12979 859 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 KLF10Q13118 480 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CSHL1Q14406 222 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 RTP5Q14D33 572 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 PHF19Q5T6S3 580 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 KLC3Q6P597 504 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TTC23LQ6PF05 361 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TMEM207Q6UWW9 146 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TMPRSS9Q7Z410 1059 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 OOSP2Q86WS3 158 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 DCUN1D3Q8IWE4 304 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SCUBE1Q8IWY4 988 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ULK2Q8IYT8 1036 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 OR52E1Q8NGJ3 308 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 OR5AR1Q8NGP9 310 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 WDR36Q8NI36 951 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SKA2Q8WVK7 121 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ANKRD49Q8WVL7 239 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 LCN9Q8WX39 176 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 RSC1A1Q92681 617 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 FAM136AQ96C01 138 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 ZDHHC12Q96GR4 267 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GPR21Q99679 349 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 CMKLR1Q99788 373 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SEMA6CQ9H3T2 930 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 AKAP7Q9P0M2 348 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 GALPQ9UBC7 116 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 TRMT6Q9UJA5 497 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 PCDHGA8Q9Y5G5 932 aa8.54□□□□□ -1.04
SMAD4-217ENST00000611848 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.54□□□□□ -1.04
SMAD4-217ENST00000611848 URB1O60287 2271 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms