RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 KBTBD6Q86V97 674 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 RNF168Q8IYW5 571 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 MIEF2Q96C03 454 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 CMTM7Q96FZ5 175 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 GAL3ST4Q96RP7 486 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SLC35A5Q9BS91 424 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 GPR174Q9BXC1 333 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ZBP1Q9H171 429 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 MUC13Q9H3R2 512 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 CLK4Q9HAZ1 481 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 IGSF5Q9NSI5 407 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SMPD3Q9NY59 655 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF282Q9UDV7 671 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TBX21Q9UL17 535 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 FZD4Q9ULV1 537 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 COL11A2P13942 1736 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PPP6CO00743 305 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 B3GALT2O43825 422 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 C8orf89P0DMQ9 161 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 THRBP10828 461 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ETS2P15036 469 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SOX6P35712 828 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 HTR6P50406 440 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 NR1H2P55055 460 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SP140Q13342 867 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ADGRE1Q14246 886 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SPIN4Q56A73 249 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 HSD11B1LQ7Z5J1 315 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 HIPK1Q86Z02 1210 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 APLFQ8IW19 511 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 KDM1BQ8NB78 822 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 CD200R1Q8TD46 325 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 KAT2AQ92830 837 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 KLHDC7BQ96G42 594 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TEFMQ96QE5 360 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 C17orf62Q9BQA9 187 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 DHRS4Q9BTZ2 278 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TPSD1Q9BZJ3 242 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PAIP1Q9H074 479 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 POLR1DQ9Y2S0 133 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 OARD1Q9Y530 152 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TRIOBPQ9H2D6 2365 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 EI24O14681 340 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC16A8O95907 504 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CYP17A1P05093 508 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ATXN1LP0C7T5 689 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DHRS4L1P0CG22 281 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 EEFSECP57772 596 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 BTN3A2P78410 334 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 XIAPP98170 497 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DOC2AQ14183 400 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TEAD4Q15561 434 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SPRED3Q2MJR0 410 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HNRNPA1L2Q32P51 320 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 KLHL12Q53G59 568 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PRRT3Q5FWE3 981 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TCEAL5Q5H9L2 206 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CYP4V2Q6ZWL3 525 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 NRSN1Q8IZ57 195 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 KRTCAP2Q8N6L1 136 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TTLQ8NG68 377 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 FAM81AQ8TBF8 368 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GTPBP3Q969Y2 492 aaKnown RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 LRCH3Q96II8 777 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC35G5Q96KT7 338 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 BTBD9Q96Q07 612 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CCDC106Q9BWC9 280 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GSDMCQ9BYG8 508 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 FANCEQ9HB96 536 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CLN6Q9NWW5 311 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GDE1Q9NZC3 331 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TRIM43BA6NCK2 446 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 A8MU76 341 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SNNO75324 88 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DIRAS1O95057 198 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 MATN4O95460 622 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PDYNP01213 254 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HIST1H2ABP04908 130 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TSPAN19P0C672 248 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ALPPL2P10696 532 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PAX7P23759 505 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GABRB3P28472 473 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 SLC7A1P30825 629 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GSTM5P46439 218 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF140P52738 457 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TBPL1P62380 186 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HYAL2Q12891 473 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 OTUD1Q5VV17 481 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-218ENST00000610726 GPR107Q5VW38 600 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 KCTD11Q693B1 232 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 NOXRED1Q6NXP6 359 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF730Q6ZMV8 503 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 PTCHD4Q6ZW05 846 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 HIST3H2AQ7L7L0 130 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 CADM2Q8N3J6 435 aa7.06□□□□□ -1.28
CSDE1-218ENST00000610726 TTC29Q8NA56 475 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms