RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 RAD51CO43502 376 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 MATN4O95460 622 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 CARSP49589 748 aaKnown RBP18.43■□□□□ 0.54
SGMS1-208ENST00000608287 PDIA2Q13087 525 aaKnown RBP18.43■□□□□ 0.54
SGMS1-208ENST00000608287 CUL1Q13616 776 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 SSPNQ14714 243 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 SLC5A12Q1EHB4 618 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 DCAF10Q5QP82 559 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 CDHR3Q6ZTQ4 885 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 MRGPREQ86SM8 312 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 SYTL1Q8IYJ3 562 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 BBOF1Q8ND07 529 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 OR2L8Q8NGY9 312 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 N4BP2L2Q92802 583 aaPredicted RBP18.43■□□□□ 0.54
SGMS1-208ENST00000608287 SLC22A18Q96BI1 424 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 GPR21Q99679 349 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 WDR77Q9BQA1 342 aaPredicted RBP18.43■□□□□ 0.54
SGMS1-208ENST00000608287 ERP44Q9BS26 406 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 AARSD1Q9BTE6 412 aaKnown RBP18.43■□□□□ 0.54
SGMS1-208ENST00000608287 TEX264Q9Y6I9 313 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 FER1L5A0AVI2 2057 aa18.43■□□□□ 0.54
SGMS1-208ENST00000608287 HIVEP1P15822 2718 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 TP73O15350 636 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 VPS26AO75436 327 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 STSP08842 583 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 COX6B1P14854 86 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 CYP2A7P20853 494 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 RORAP35398 523 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 CALCOCO2Q13137 446 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 B3GNTL1Q67FW5 361 aaPredicted RBP18.42■□□□□ 0.54
SGMS1-208ENST00000608287 FAM198BQ6UWH4 519 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 FAM20CQ8IXL6 584 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 OR1L3Q8NH93 324 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 GIMAP7Q8NHV1 300 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 PPP4R1Q8TF05 950 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 INPP5DQ92835 1189 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 NDNQ99608 321 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 WDR83Q9BRX9 315 aaKnown RBP18.42■□□□□ 0.54
SGMS1-208ENST00000608287 ACTR5Q9H9F9 607 aaPredicted RBP18.42■□□□□ 0.54
SGMS1-208ENST00000608287 PLAC1Q9HBJ0 212 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 FAM60AQ9NP50 221 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.42■□□□□ 0.54
SGMS1-208ENST00000608287 KLHL42Q9P2K6 505 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 SUCOQ9UBS9 1254 aaKnown RBP18.42■□□□□ 0.54
SGMS1-208ENST00000608287 SERTAD3Q9UJW9 196 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 ITGB1BP2Q9UKP3 347 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 MED16Q9Y2X0 877 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 DHRS7Q9Y394 339 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 ZFHX3Q15911 3703 aa18.42■□□□□ 0.54
SGMS1-208ENST00000608287 MSL3P1P0C860 447 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 OTX2P32243 289 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 TSFMP43897 325 aaKnown RBP18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SOX8P57073 446 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 DEFB110Q30KQ9 67 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 PRAMEF17Q5VTA0 474 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 MTFR2Q6P444 385 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 CUZD1Q86UP6 607 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SPNS2Q8IVW8 549 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 CNTN4Q8IWV2 1026 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SLC38A9Q8NBW4 561 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 FBXO36Q8NEA4 188 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 CD200R1Q8TD46 325 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 FAR1Q8WVX9 515 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 ZNF552Q9H707 407 aaPredicted RBP18.41■□□□□ 0.54
SGMS1-208ENST00000608287 FAM114A2Q9NRY5 505 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SLC17A6Q9P2U8 582 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 NTNG1Q9Y2I2 539 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 PDZD2O15018 2839 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SEC16AO15027 2179 aa18.41■□□□□ 0.54
SGMS1-208ENST00000608287 SNRNP200O75643 2136 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 SVILO95425 2214 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 ARHGEF33A8MVX0 844 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 PSIP1O75475 530 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 AHSGP02765 367 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 CATP04040 527 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 GABRB3P28472 473 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 FASTKD3Q14CZ7 662 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 SF1Q15637 639 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 ZIC1Q15915 447 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 VWA2Q5GFL6 755 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 TEDDM1Q5T9Z0 273 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 IRAK1BP1Q5VVH5 260 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 STEAP4Q687X5 459 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 UGT3A1Q6NUS8 523 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 TRMT10BQ6PF06 316 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 SPNS3Q6ZMD2 512 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 KIAA0408Q6ZU52 694 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 NEK10Q6ZWH5 1172 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 FJX1Q86VR8 437 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 CPNE9Q8IYJ1 553 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 DENND1AQ8TEH3 1009 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 PCMTD2Q9NV79 361 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 SPATA7Q9P0W8 599 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 WHRNQ9P202 907 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 TRMT6Q9UJA5 497 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 KLHL20Q9Y2M5 609 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 CELSR1Q9NYQ6 3014 aa18.4■□□□□ 0.54
SGMS1-208ENST00000608287 MDC1Q14676 2089 aaKnown RBP18.4■□□□□ 0.54
SGMS1-208ENST00000608287 E7EQ34 232 aa18.39■□□□□ 0.53
SGMS1-208ENST00000608287 E2F3O00716 465 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms