RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 B3GNTL1Q67FW5 361 aaPredicted RBP23.18■■□□□ 1.3
SNX5-219ENST00000606602 KIAA0930Q6ICG6 404 aaPredicted RBP23.18■■□□□ 1.3
SNX5-219ENST00000606602 PLCD4Q9BRC7 762 aa23.18■■□□□ 1.3
SNX5-219ENST00000606602 YIPF2Q9BWQ6 316 aa23.18■■□□□ 1.3
SNX5-219ENST00000606602 CDC14AQ9UNH5 594 aa23.18■■□□□ 1.3
SNX5-219ENST00000606602 PCM1Q15154 2024 aa23.18■■□□□ 1.3
SNX5-219ENST00000606602 E5RI56 91 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 MYO1CO00159 1063 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 CEP104O60308 925 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 AVILO75366 819 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 PSIP1O75475 530 aaKnown RBP23.17■■□□□ 1.3
SNX5-219ENST00000606602 KLHL18O94889 574 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 CATP04040 527 aaKnown RBP23.17■■□□□ 1.3
SNX5-219ENST00000606602 PKMP14618 531 aaKnown RBP23.17■■□□□ 1.3
SNX5-219ENST00000606602 PAMP19021 973 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 OGNP20774 298 aaKnown RBP23.17■■□□□ 1.3
SNX5-219ENST00000606602 TRIP13Q15645 432 aaPredicted RBP23.17■■□□□ 1.3
SNX5-219ENST00000606602 ATG9BQ674R7 924 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 CASC4Q6P4E1 433 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 LAPTM4BQ86VI4 370 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 KBTBD2Q8IY47 623 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 CSNK1A1LQ8N752 337 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 LMF1Q96S06 567 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 HOMER3Q9NSC5 361 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 TRPC4Q9UBN4 977 aa23.17■■□□□ 1.3
SNX5-219ENST00000606602 IGLV3-12A0A075B6K2 115 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 NSG1A0A0A6YYJ2 146 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 PHF2O75151 1096 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 DCTP40126 519 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 VPS41P49754 854 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 EMP2P54851 167 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 EMP3P54852 163 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 SARNPP82979 210 aaKnown RBP23.16■■□□□ 1.3
SNX5-219ENST00000606602 ARHGAP19Q14CB8 494 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 NEPROQ6NW34 567 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 CENPUQ71F23 418 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 PAQR7Q86WK9 346 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 CATSPER1Q8NEC5 780 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 FAR1Q8WVX9 515 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 PKP4Q99569 1192 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 TAC3Q9UHF0 121 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 OSGIN2Q9Y236 505 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 RUVBL1Q9Y265 456 aaKnown RBP23.16■■□□□ 1.3
SNX5-219ENST00000606602 VPS9D1Q9Y2B5 631 aa23.16■■□□□ 1.3
SNX5-219ENST00000606602 NUP210LQ5VU65 1888 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 IGKV1-8A0A0C4DH67 115 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 E2F3O00716 465 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 FFAR3O14843 346 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 GPR42O15529 346 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 PRPF4O43172 522 aaKnown RBP eCLIP23.15■■□□□ 1.31e-17■■■□□ 17.2
SNX5-219ENST00000606602 USP1O94782 785 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 EDN3P14138 238 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 CXCR2P25025 360 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 CXCR5P32302 372 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 HSD17B2P37059 387 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 PNLIPRP1P54315 467 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 DSG2Q14126 1118 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 KCNJ11Q14654 390 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 HKDC1Q2TB90 917 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 NDUFAF7Q7L592 441 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 CILP2Q8IUL8 1156 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 MVB12AQ96EY5 273 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 TRIM56Q9BRZ2 755 aaKnown RBP23.15■■□□□ 1.3
SNX5-219ENST00000606602 SYNPO2LQ9H987 977 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 INTS10Q9NVR2 710 aaKnown RBP23.15■■□□□ 1.3
SNX5-219ENST00000606602 UTP6Q9NYH9 597 aaKnown RBP23.15■■□□□ 1.3
SNX5-219ENST00000606602 SAMD15Q9P1V8 674 aa23.15■■□□□ 1.3
SNX5-219ENST00000606602 ZNF839A8K0R7 811 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 IDSB3KWA1 339 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 LRRTM2O43300 516 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 CCNDBP1O95273 360 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 PRDX1Q06830 199 aaKnown RBP23.14■■□□□ 1.29
SNX5-219ENST00000606602 GPS1Q13098 491 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 TTLL9Q3SXZ7 439 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 ICE2Q659A1 982 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 FAM180AQ6UWF9 173 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 REXO1L1PQ8IX06 675 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 PRELID2Q8N945 189 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 PPFIBP2Q8ND30 876 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 OR1N1Q8NGS0 311 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 RERGQ96A58 199 aaPredicted RBP23.14■■□□□ 1.29
SNX5-219ENST00000606602 MMABQ96EY8 250 aaPredicted RBP23.14■■□□□ 1.29
SNX5-219ENST00000606602 ABCF3Q9NUQ8 709 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 PTGFRNQ9P2B2 879 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 CENPEQ02224 2701 aa23.14■■□□□ 1.29
SNX5-219ENST00000606602 CTAGE9A4FU28 777 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 SLC16A8O95907 504 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 HEXBP07686 556 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 ANXA5P08758 320 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 CCDC175P0C221 793 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 PRR35P0CG20 571 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 COX6A1P12074 109 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 CLCN7P51798 805 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 ARG2P78540 354 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 EEF1A2Q05639 463 aaKnown RBP23.13■■□□□ 1.29
SNX5-219ENST00000606602 DHX34Q14147 1143 aaKnown RBP23.13■■□□□ 1.29
SNX5-219ENST00000606602 ZNF470Q6ECI4 717 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 FAAH2Q6GMR7 532 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 ZNF425Q6IV72 752 aa23.13■■□□□ 1.29
SNX5-219ENST00000606602 ADCK2Q7Z695 626 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms