RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 KLHL22Q53GT1 634 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MAMDC4Q6UXC1 1216 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 VRK2Q86Y07 508 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ENTHD1Q8IYW4 607 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CENPLQ8N0S6 344 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ZNF687Q8N1G0 1237 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TERB1Q8NA31 727 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 STEAP2Q8NFT2 490 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ATOH1Q92858 354 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 UFD1Q92890 307 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TOP1MTQ969P6 601 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 FERMT1Q9BQL6 677 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 C7orf50Q9BRJ6 194 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 DNTTIP1Q9H147 329 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SPNS1Q9H2V7 528 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 HIPK2Q9H2X6 1198 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 OLFML3Q9NRN5 406 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 DDX19AQ9NUU7 478 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PGPEP1Q9NXJ5 209 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MTCH1Q9NZJ7 389 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MRPL15Q9P015 296 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TNNQ9UQP3 1299 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 EXOGQ9Y2C4 368 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 KCNE2Q9Y6J6 123 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SRCAPQ6ZRS2 3230 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 WDR17Q8IZU2 1322 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 A0A0A6YYK5 440 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SIGLEC16A6NMB1 481 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 LRRN3E7EW58 273 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 WWP2O00308 870 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CCSO14618 274 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 B4GALT2O60909 372 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 HUS1O60921 280 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CTNSO60931 367 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SLCO2B1O94956 709 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 IL18RAPO95256 599 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PNLIPRP1P54315 467 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CCZ1BP86790 482 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CCZ1P86791 482 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TEFQ10587 303 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PHYHD1Q5SRE7 291 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 DCST1Q5T197 706 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 LRRC66Q68CR7 880 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MRNIPQ6NTE8 343 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 RBM44Q6ZP01 1051 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 LRRC74BQ6ZQY2 392 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PRR23BQ6ZRT6 265 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 LINC00696Q6ZRV3 163 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 UBE2R2Q712K3 238 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 VTCN1Q7Z7D3 282 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SLC25A41Q8N5S1 370 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 L3MBTL4Q8NA19 623 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 OR6X1Q8NH79 312 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MAGEE2Q8TD90 523 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ELP5Q8TE02 316 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 EDEM1Q92611 657 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SPSB4Q96A44 273 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PAGE5Q96GU1 130 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 MMP19Q99542 508 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 FEM1AQ9BSK4 669 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 OR2AG1Q9H205 316 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PPA2Q9H2U2 334 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 LRRN3Q9H3W5 708 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 RXFP1Q9HBX9 757 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PRDM8Q9NQV8 689 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 DUSP22Q9NRW4 184 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PRMT7Q9NVM4 692 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TEX10Q9NXF1 929 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 KCNJ14Q9UNX9 436 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 NUBP2Q9Y5Y2 271 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SPATA31A1Q5TZJ5 1347 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 HELTA6NFD8 242 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 NME6O75414 186 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 CSF1RP07333 972 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 HOXD4P09016 255 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ZDHHC11BP0C7U3 371 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ELNP15502 786 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 UCP1P25874 307 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 FOXN2P32314 431 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SLC1A2P43004 574 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PREPP48147 710 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ATP5J2P56134 94 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 GPC5P78333 572 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 BNC1Q01954 994 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ACSM1Q08AH1 577 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TUBB2AQ13885 445 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 HEPACAMQ14CZ8 416 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 AP5B1Q2VPB7 878 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 TMEM65Q6PI78 240 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 PRSS42Q7Z5A4 293 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 RTN4RL1Q86UN2 441 aaPredicted RBP5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 SLITRK4Q8IW52 837 aa5.66□□□□□ -1.5
COL4A3BP-207ENST00000604926 ADGRF2Q8IZF7 708 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms