RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SPNS2Q8IVW8 549 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 PRSS58Q8IYP2 241 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 SPC24Q8NBT2 197 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 FAM136AQ96C01 138 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 VPS50Q96JG6 964 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 CNDP1Q96KN2 507 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 OR2A5Q96R48 311 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 TCF12Q99081 682 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ACAT2Q9BWD1 397 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 TSGA10Q9BZW7 698 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 EPS8L2Q9H6S3 715 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 CSMD1Q96PZ7 3565 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 H3BMM5 538 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 LRRTM2O43300 516 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 CMPK1P30085 196 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 SLC26A3P40879 764 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 CLCN7P51798 805 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 EFNA3P52797 238 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 SNRPNP63162 240 aaKnown RBP17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 CDK16Q00536 496 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 DSG2Q14126 1118 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 RNF187Q5TA31 235 aaPredicted RBP17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 TICAM1Q8IUC6 712 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 KBTBD2Q8IY47 623 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 AMER2Q8N7J2 671 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 AMER3Q8N944 861 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 SMPDL3AQ92484 453 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 PKP4Q99569 1192 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 SLC30A3Q99726 388 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 TSR3Q9UJK0 312 aaKnown RBP17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 OSGIN2Q9Y236 505 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 RUVBL1Q9Y265 456 aaKnown RBP17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
CHMP2A-208ENST00000601220 MAP2K7O14733 419 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 FFAR3O14843 346 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 GPR42O15529 346 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 FOXS1O43638 330 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 PHF2O75151 1096 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 AVILO75366 819 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 FGGP02679 453 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 PRR35P0CG20 571 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 CHRM3P20309 590 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 OGNP20774 298 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 FBLP22087 321 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 MAGEA6P43360 314 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 RELAQ04206 551 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 PRDX1Q06830 199 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 KCNJ11Q14654 390 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 ARHGAP19Q14CB8 494 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 NAA25Q14CX7 972 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 HKDC1Q2TB90 917 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 KLHL38Q2WGJ6 581 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 CILP2Q8IUL8 1156 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 LRRC56Q8IYG6 542 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 TGIF2Q9GZN2 237 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 MRPS30Q9NP92 439 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 PLA2G3Q9NZ20 509 aa17.11■□□□□ 0.33
CHMP2A-208ENST00000601220 IGHV1-45A0A0A0MS14 117 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 IDSB3KWA1 339 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 E7ENX8 843 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 USP1O94782 785 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 SERPINA7P05543 415 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 STSP08842 583 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 TDGF1P3P51864 188 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 EMP2P54851 167 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 TAP2Q03519 686 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 C1QL3Q5VWW1 255 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 ICE2Q659A1 982 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 CYHR1Q6ZMK1 362 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 CAND1Q86VP6 1230 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 REXO1L1PQ8IX06 675 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 OTUD6BQ8N6M0 293 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 CSNK1A1LQ8N752 337 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 FBXO15Q8NCQ5 510 aaPredicted RBP17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 OR1N1Q8NGS0 311 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 GIMAP7Q8NHV1 300 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 BRIX1Q8TDN6 353 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 HAS2Q92819 552 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 CABS1Q96KC9 395 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 TAAR6Q96RI8 345 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 TRPC4Q9UBN4 977 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 CDC14AQ9UNH5 594 aa17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 MRPS2Q9Y399 296 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-208ENST00000601220 MDC1Q14676 2089 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 CRYBG3Q68DQ2 2970 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 LOC102723996A0A087X1L8 192 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 SLC16A8O95907 504 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 CELA2AP08217 269 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 F7P08709 466 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ERVK-10P10266 1014 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 RPA3P35244 121 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms