RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SCNM1Q9BWG6 230 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SHCBP1LQ9BZQ2 653 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 RAB33BQ9H082 229 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 PCBD2Q9H0N5 130 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SLC6A20Q9NP91 592 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SEMA4BQ9NPR2 832 aaPredicted RBP8.95□□□□□ -0.98
ZNF548-206ENST00000597047 STARD5Q9NSY2 213 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SLC39A1Q9NY26 324 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 EPHA6Q9UF33 1036 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 KLK13Q9UKR3 277 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SATB2Q9UPW6 733 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 PLLPQ9Y342 182 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 ASB1Q9Y576 335 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 KCNE2Q9Y6J6 123 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 MN1Q10571 1320 aaPredicted RBP8.95□□□□□ -0.98
ZNF548-206ENST00000597047 PTPRBP23467 1997 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 SNRNP200O75643 2136 aaKnown RBP8.95□□□□□ -0.98
ZNF548-206ENST00000597047 KIF26BQ2KJY2 2108 aa8.95□□□□□ -0.98
ZNF548-206ENST00000597047 CEP250Q9BV73 2442 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 CCDC187A0A096LP49 1063 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TMEM150CB9EJG8 249 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 E7EQ34 232 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 K7EPI3 171 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 HAT1O14929 419 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 OR1F1O43749 312 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 PRICKLE3O43900 615 aaPredicted RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SH3BGRLO75368 114 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 IPO13O94829 963 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ERGP11308 486 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 PCNAP12004 261 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 FOLR1P15328 257 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 EPB42P16452 691 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 GRK3P35626 688 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ETV5P41161 510 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SLC6A12P48065 614 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 PDX1P52945 283 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 GABREP78334 506 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ABATP80404 500 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 IRF8Q02556 426 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ZFP36L1Q07352 338 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SQSTM1Q13501 440 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TUBB3Q13509 450 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TRA2AQ13595 282 aaKnown RBP eCLIP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 GTF2H2Q13888 395 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ZIC1Q15915 447 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 CLPPQ16740 277 aaPredicted RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TTMPQ5BVD1 217 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 GTF2H2CQ6P1K8 395 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ZYG11AQ6WRX3 759 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 LRRC70Q7Z2Q7 622 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 GOLGA7Q7Z5G4 137 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ARHGAP22Q7Z5H3 698 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 LCA5Q86VQ0 697 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 NUDCD3Q8IVD9 361 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SLC22A9Q8IVM8 553 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 WDR36Q8NI36 951 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 FLVCR1-AS1Q8TAF5 88 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 HMGCLL1Q8TB92 370 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TRPC4APQ8TEL6 797 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SREK1Q8WXA9 508 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 CCT6BQ92526 530 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 NEIL2Q969S2 332 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 MTFMTQ96DP5 389 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 PRR11Q96HE9 360 aaPredicted RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ATP6V1G3Q96LB4 118 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 NSUN5Q96P11 429 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 OR4K3Q96R72 315 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SH3GL2Q99962 352 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SGPP1Q9BX95 441 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ZNF768Q9H5H4 540 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 NOL11Q9H8H0 719 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 IPPKQ9H8X2 491 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 ACTR8Q9H981 624 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 FANCEQ9HB96 536 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 FAM60AQ9NP50 221 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 NKIRAS1Q9NYS0 192 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 MID2Q9UJV3 735 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TMCO1Q9UM00 188 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 SNX7Q9UNH6 387 aa8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TNPO3Q9Y5L0 923 aaKnown RBP8.94□□□□□ -0.98
ZNF548-206ENST00000597047 TMEM120BA0PK00 339 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 G3V2L1 256 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 H3BQF6 201 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 PLD2O14939 933 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 POLR1CO15160 346 aaPredicted RBP8.93□□□□□ -0.98
ZNF548-206ENST00000597047 HCRTR1O43613 425 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 TYROBPO43914 113 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 CRCPO75575 148 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 TNFSF15O95150 251 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 CTSBP07858 339 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 C1GALT1C1LP0DN25 315 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 FGF3P11487 239 aaPredicted RBP8.93□□□□□ -0.98
ZNF548-206ENST00000597047 NELFEP18615 380 aaKnown RBP8.93□□□□□ -0.98
ZNF548-206ENST00000597047 GNAZP19086 355 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 RBMS1P29558 406 aaKnown RBP8.93□□□□□ -0.98
ZNF548-206ENST00000597047 ALDH3A1P30838 453 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 CCKBRP32239 447 aa8.93□□□□□ -0.98
ZNF548-206ENST00000597047 PIK3CGP48736 1102 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms