RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MUM1Q2TAK8 710 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 UGT3A1Q6NUS8 523 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 SHISA6Q6ZSJ9 500 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 UBE2R2Q712K3 238 aaPredicted RBP22.41■■□□□ 1.18
LSM4-204ENST00000594828 PAQR7Q86WK9 346 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 PNPLA2Q96AD5 504 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 NAT9Q9BTE0 207 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 ZNF552Q9H707 407 aaPredicted RBP22.41■■□□□ 1.18
LSM4-204ENST00000594828 VPS4AQ9UN37 437 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 MAP4K5Q9Y4K4 846 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 PCM1Q15154 2024 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 VSTM2BA6NLU5 285 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 EIF3FO00303 357 aaPredicted RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 BANF1O75531 89 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 SKIV2L2P42285 1042 aaKnown RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 EMP3P54852 163 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 ABATP80404 500 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 OCA2Q04671 838 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 AIMP2Q13155 320 aaKnown RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 PRTGQ2VWP7 1150 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 MSS51Q4VC12 460 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 SPANXN3Q5MJ09 141 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 SLC6A19Q695T7 634 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 ZNF425Q6IV72 752 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 PIWIL4Q7Z3Z4 852 aaKnown RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 CABS1Q96KC9 395 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 LUZP4Q9P127 313 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 TRMT6Q9UJA5 497 aaKnown RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 FBXL4Q9UKA2 621 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 SETXQ7Z333 2677 aaKnown RBP22.4■■□□□ 1.18
LSM4-204ENST00000594828 ANKRD12Q6UB98 2062 aa22.4■■□□□ 1.18
LSM4-204ENST00000594828 USP27XA6NNY8 438 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 SOCS6O14544 535 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 IPO13O94829 963 aaKnown RBP22.39■■□□□ 1.17
LSM4-204ENST00000594828 IVDP26440 423 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 INPP5JQ15735 1006 aaPredicted RBP22.39■■□□□ 1.17
LSM4-204ENST00000594828 BBS9Q3SYG4 887 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 THEMIS2Q5TEJ8 643 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 LRRC8EQ6NSJ5 796 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 LRRC56Q8IYG6 542 aaPredicted RBP22.39■■□□□ 1.17
LSM4-204ENST00000594828 CSNK1A1LQ8N752 337 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 Q8NA96 180 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 CAPZA3Q96KX2 299 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 C10orf90Q96M02 699 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 NDNQ99608 321 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 SEMA3GQ9NS98 782 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 TAS2R13Q9NYV9 303 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 ZNF282Q9UDV7 671 aaPredicted RBP22.39■■□□□ 1.17
LSM4-204ENST00000594828 CDC14AQ9UNH5 594 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 HS3ST3B1Q9Y662 390 aa22.39■■□□□ 1.17
LSM4-204ENST00000594828 CLEC18AA5D8T8 446 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 EZRP15311 586 aaKnown RBP22.38■■□□□ 1.17
LSM4-204ENST00000594828 ITGA3P26006 1051 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 GABRB3P28472 473 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 CARSP49589 748 aaKnown RBP22.38■■□□□ 1.17
LSM4-204ENST00000594828 GNG11P61952 73 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 RELAQ04206 551 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 RBBP7Q16576 425 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 KIRREL2Q6UWL6 708 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 IGFL3Q6UXB1 125 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 CLEC18BQ6UXF7 455 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 ADCK2Q7Z695 626 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 IGDCC3Q8IVU1 814 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 KLHL7Q8IXQ5 586 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 CLEC18CQ8NCF0 446 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 GALNT11Q8NCW6 608 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 STT3BQ8TCJ2 826 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 MCOLN3Q8TDD5 553 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 EEF1AKMT1Q8WVE0 214 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 RERGQ96A58 199 aaPredicted RBP22.38■■□□□ 1.17
LSM4-204ENST00000594828 MIEF2Q96C03 454 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 VPS50Q96JG6 964 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 OR2A5Q96R48 311 aa22.38■■□□□ 1.17
LSM4-204ENST00000594828 RUVBL1Q9Y265 456 aaKnown RBP22.38■■□□□ 1.17
LSM4-204ENST00000594828 AHSGP02765 367 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 ZGLP1P0C6A0 271 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 FBLP22087 321 aaKnown RBP22.37■■□□□ 1.17
LSM4-204ENST00000594828 IMPA1P29218 277 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 RGS4P49798 205 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 TIAL1Q01085 375 aaKnown RBP eCLIP22.37■■□□□ 1.17
LSM4-204ENST00000594828 KLC1Q07866 573 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 MORF4L2Q15014 288 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 HKDC1Q2TB90 917 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 PLEKHN1Q494U1 663 aaPredicted RBP22.37■■□□□ 1.17
LSM4-204ENST00000594828 PRAMEF13Q5VWM6 474 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 KIAA0408Q6ZU52 694 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 SYDE1Q6ZW31 735 aaPredicted RBP22.37■■□□□ 1.17
LSM4-204ENST00000594828 CREG2Q8IUH2 290 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 CNTN4Q8IWV2 1026 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 PALM2Q8IXS6 379 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 PDIK1LQ8N165 341 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 FAM26EQ8N5C1 309 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 TM9SF4Q92544 642 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 CERS2Q96G23 380 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 RUNDC3BQ96NL0 473 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 CRB3Q9BUF7 120 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 SYNPO2LQ9H987 977 aa22.37■■□□□ 1.17
LSM4-204ENST00000594828 PPANQ9NQ55 473 aaKnown RBP22.37■■□□□ 1.17
LSM4-204ENST00000594828 H7BY64 318 aa22.36■■□□□ 1.17
LSM4-204ENST00000594828 TXNDC9O14530 226 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms