RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 IQANK1A0A1B0GTG1 560 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 H3BMH7 237 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 KLHL2O95198 593 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 COL6A2P12110 1019 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 NPPBP16860 134 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 ACAP2Q15057 778 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 TGIF1Q15583 401 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 ERCC6LQ2NKX8 1250 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 DEFB110Q30KQ9 67 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 YOD1Q5VVQ6 348 aaPredicted RBP24.71■■□□□ 1.55
TRIM28-204ENST00000594806 SULT1C3Q6IMI6 304 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 TIFABQ6ZNK6 161 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 TIPARPQ7Z3E1 657 aaKnown RBP24.71■■□□□ 1.55
TRIM28-204ENST00000594806 PAQR7Q86WK9 346 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 GALNT6Q8NCL4 622 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 PTERQ96BW5 349 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 RHBDF1Q96CC6 855 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 ZNF285Q96NJ3 590 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 FAM117AQ9C073 453 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 SLC7A5P2Q9GIP4 190 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 ACTR5Q9H9F9 607 aaPredicted RBP24.71■■□□□ 1.55
TRIM28-204ENST00000594806 ABCF3Q9NUQ8 709 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 RNF112Q9ULX5 631 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 SRPK3Q9UPE1 567 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 USP24Q9UPU5 2620 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 EPG5Q9HCE0 2579 aa24.71■■□□□ 1.55
TRIM28-204ENST00000594806 MDC1Q14676 2089 aaKnown RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 IGKV1-8A0A0C4DH67 115 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 SYCE1LA8MT33 242 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 TRIM49D1C9J1S8 452 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 ZSCAN9O15535 394 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 CTSVO60911 334 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 KERAO60938 352 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 IPO13O94829 963 aaKnown RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 KLK3P07288 261 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 TFEBP19484 476 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 DLG1Q12959 904 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 OR4D1Q15615 310 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 ZXDCQ2QGD7 858 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 KLHDC8AQ8IYD2 350 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 CENPLQ8N0S6 344 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 KIAA1143Q96AT1 154 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 ALKBH8Q96BT7 664 aaKnown RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 NXNL1Q96CM4 212 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 DPH2Q9BQC3 489 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 SELENOSQ9BQE4 189 aa24.7■■□□□ 1.54
TRIM28-204ENST00000594806 CNOT10Q9H9A5 744 aaKnown RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 PSMC3IPQ9P2W1 217 aaPredicted RBP24.7■■□□□ 1.54
TRIM28-204ENST00000594806 HCRTR1O43613 425 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 S100BP04271 92 aaPredicted RBP24.69■■□□□ 1.54
TRIM28-204ENST00000594806 NTRK1P04629 796 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 ITPKBP27987 946 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 GCAP28676 217 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 GGT5P36269 586 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 STAT5AP42229 794 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 ARSFP54793 590 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 TMPRSS3P57727 454 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 YBX1P67809 324 aaKnown RBP24.69■■□□□ 1.54
TRIM28-204ENST00000594806 PTCHD3Q3KNS1 767 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 FBXO42Q6P3S6 717 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 PDPRQ8NCN5 879 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 KCTD4Q8WVF5 259 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 PYCR2Q96C36 320 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 UNKQ9C0B0 810 aaKnown RBP24.69■■□□□ 1.54
TRIM28-204ENST00000594806 VPS11Q9H270 941 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 ALG9Q9H6U8 611 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 LHX9Q9NQ69 397 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 IRAK4Q9NWZ3 460 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 NUDT4Q9NZJ9 180 aa24.69■■□□□ 1.54
TRIM28-204ENST00000594806 A0A0J9YVX5 310 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 ZNF749O43361 778 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 GRM7Q14831 915 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 RASA2Q15283 850 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 TSNAXIP1Q2TAA8 658 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 RHBDD2Q6NTF9 364 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 ADCK2Q7Z695 626 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 ABHD11Q8NFV4 315 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 PROKR1Q8TCW9 393 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 AENQ8WTP8 325 aaKnown RBP24.68■■□□□ 1.54
TRIM28-204ENST00000594806 CLIP3Q96DZ5 547 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 THAP11Q96EK4 314 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 ATOH8Q96SQ7 321 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 CAPS2Q9BXY5 557 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 SPRTNQ9H040 489 aaPredicted RBP24.68■■□□□ 1.54
TRIM28-204ENST00000594806 CD274Q9NZQ7 290 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.68■■□□□ 1.543e-7■□□□□ 8
TRIM28-204ENST00000594806 KCNE2Q9Y6J6 123 aa24.68■■□□□ 1.54
TRIM28-204ENST00000594806 V9GYY5 206 aaPredicted RBP24.68■■□□□ 1.54
TRIM28-204ENST00000594806 H7BY64 318 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 TXNDC9O14530 226 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 GRK3P35626 688 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 SLC6A12P48065 614 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 RPS15AP62244 130 aaKnown RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 FAM214AQ32MH5 1076 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 ZNF517Q6ZMY9 492 aaPredicted RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 THOC6Q86W42 341 aaKnown RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 DSELQ8IZU8 1212 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 TTC29Q8NA56 475 aaPredicted RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 HNRNPLLQ8WVV9 542 aaKnown RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 CAVIN3Q969G5 261 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms