RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SLC2A4P14672 509 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 XRCC1P18887 633 aaPredicted RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 GNAZP19086 355 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 EPHA3P29320 983 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 HMOX2P30519 316 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 ARL1P40616 181 aaPredicted RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 CASP2P42575 452 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 RAB28P51157 221 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 IRF8Q02556 426 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 CHIT1Q13231 466 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 TRIP6Q15654 476 aaKnown RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 TBCCQ15814 346 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 LSM12Q3MHD2 195 aaKnown RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 IYDQ6PHW0 289 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 LCTLQ6UWM7 567 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 RABEPKQ7Z6M1 372 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 DCBLD1Q8N8Z6 715 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 PPFIBP2Q8ND30 876 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 ADAMTS14Q8WXS8 1223 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 SMPDL3AQ92484 453 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 ERP27Q96DN0 273 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 IL17FQ96PD4 163 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 PCBD2Q9H0N5 130 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 TAAR2Q9P1P5 351 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 ZNF624Q9P2J8 865 aaPredicted RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 APOBEC3BQ9UH17 382 aaKnown RBP13.01□□□□□ -0.33
VMP1-217ENST00000593168 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 DYRK1BQ9Y463 629 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 PRAMEF4O60810 478 aa13□□□□□ -0.33
VMP1-217ENST00000593168 KRT6AP02538 564 aa13□□□□□ -0.33
VMP1-217ENST00000593168 KRT6BP04259 564 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SYPP08247 313 aa13□□□□□ -0.33
VMP1-217ENST00000593168 JUPP14923 745 aa13□□□□□ -0.33
VMP1-217ENST00000593168 HNF4AP41235 474 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SLC19A1P41440 591 aa13□□□□□ -0.33
VMP1-217ENST00000593168 KRT6CP48668 564 aa13□□□□□ -0.33
VMP1-217ENST00000593168 ZNF33BQ06732 778 aa13□□□□□ -0.33
VMP1-217ENST00000593168 FASTKQ14296 549 aaKnown RBP13□□□□□ -0.33
VMP1-217ENST00000593168 ELOCQ15369 112 aa13□□□□□ -0.33
VMP1-217ENST00000593168 TEAD4Q15561 434 aa13□□□□□ -0.33
VMP1-217ENST00000593168 GALNTL6Q49A17 601 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PRRT3Q5FWE3 981 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PRAMEF14Q5SWL7 426 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PRAMEF13Q5VWM6 474 aa13□□□□□ -0.33
VMP1-217ENST00000593168 CCDC121Q6ZUS5 278 aa13□□□□□ -0.33
VMP1-217ENST00000593168 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.33
VMP1-217ENST00000593168 TAF8Q7Z7C8 310 aa13□□□□□ -0.33
VMP1-217ENST00000593168 CLNKQ7Z7G1 428 aa13□□□□□ -0.33
VMP1-217ENST00000593168 DDIASQ8IXT1 998 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
VMP1-217ENST00000593168 OR52E1Q8NGJ3 308 aa13□□□□□ -0.33
VMP1-217ENST00000593168 OR2L8Q8NGY9 312 aa13□□□□□ -0.33
VMP1-217ENST00000593168 CXorf40BQ96DE9 158 aa13□□□□□ -0.33
VMP1-217ENST00000593168 WDR34Q96EX3 536 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PPP1R36Q96LQ0 422 aa13□□□□□ -0.33
VMP1-217ENST00000593168 NMUR2Q9GZQ4 415 aa13□□□□□ -0.33
VMP1-217ENST00000593168 EHD1Q9H4M9 534 aa13□□□□□ -0.33
VMP1-217ENST00000593168 ERVMER34-1Q9H9K5 563 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SAR1AQ9NR31 198 aa13□□□□□ -0.33
VMP1-217ENST00000593168 MRGBPQ9NV56 204 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SPASTQ9UBP0 616 aa13□□□□□ -0.33
VMP1-217ENST00000593168 PLAGL1Q9UM63 463 aa13□□□□□ -0.33
VMP1-217ENST00000593168 SNX6Q9UNH7 406 aa13□□□□□ -0.33
VMP1-217ENST00000593168 CELSR3Q9NYQ7 3312 aa13□□□□□ -0.33
VMP1-217ENST00000593168 KCNE1BA0A087WTH5 132 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 KIR2DS5A0A0G2JLQ3 304 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 A0A0G2JNG1 304 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 A0A1B0GTW7 788 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 SERTM1A2A2V5 107 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 KIR2DS3K7RE56 304 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 SLC28A1O00337 649 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 MANBAO00462 879 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 ULK1O75385 1050 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 GNSP15586 552 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 ADSLP30566 484 aaPredicted RBP12.99□□□□□ -0.33
VMP1-217ENST00000593168 PKLRP30613 574 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 CSNK1EP49674 416 aaKnown RBP12.99□□□□□ -0.33
VMP1-217ENST00000593168 C21orf59P57076 290 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 HNRNPKP61978 463 aaKnown RBP eCLIP12.99□□□□□ -0.33
VMP1-217ENST00000593168 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 DOC2AQ14183 400 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 KIR2DS5Q14953 304 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 KRT72Q14CN4 511 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 LACTB2Q53H82 288 aaPredicted RBP12.99□□□□□ -0.33
VMP1-217ENST00000593168 XKR7Q5GH72 579 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 ATG9BQ674R7 924 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 NXNQ6DKJ4 435 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 GRHL2Q6ISB3 625 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 SUSD1Q6UWL2 747 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 LAYNQ6UX15 382 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 SLCO4C1Q6ZQN7 724 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 CHSY3Q70JA7 882 aa12.99□□□□□ -0.33
VMP1-217ENST00000593168 TRIM46Q7Z4K8 759 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms