RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FDXRP22570 491 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 MAGEA3P43357 314 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 TSFMP43897 325 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 OR1D4P47884 311 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 VPS41P49754 854 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 PNLIPRP1P54315 467 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 PRDX1Q06830 199 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 KLC1Q07866 573 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 DSG2Q14126 1118 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 NR6A1Q15406 480 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 ICE2Q659A1 982 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 ZNF425Q6IV72 752 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 LRRC8EQ6NSJ5 796 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 PAQR7Q86WK9 346 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 OR4N4Q8N0Y3 316 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 METTL27Q8N6F8 245 aaPredicted RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 STT3BQ8TCJ2 826 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 CABS1Q96KC9 395 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 EBNA1BP2Q99848 306 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 AGPAT4Q9NRZ5 378 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 ASF1BQ9NVP2 202 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
APOC1-209ENST00000592885 MAU2Q9Y6X3 613 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 HEATR5BQ9P2D3 2071 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 HIVEP3Q5T1R4 2406 aa12.66□□□□□ -0.38
APOC1-209ENST00000592885 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 H0YGG7 62 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 MED26O95402 600 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 SLC16A8O95907 504 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 EIF2S1P05198 315 aaKnown RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 HRH2P25021 359 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 COILP38432 576 aaPredicted RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 SLC1A2P43004 574 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 FBXO42Q6P3S6 717 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 SUSD1Q6UWL2 747 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 CUZD1Q86UP6 607 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 TMEM151BQ8IW70 566 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 CISD2Q8N5K1 135 aaKnown RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 GABPB2Q8TAK5 448 aaPredicted RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 GRK7Q8WTQ7 553 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 ZNF480Q8WV37 535 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 ASB11Q8WXH4 323 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 RERGQ96A58 199 aaPredicted RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 FAM136AQ96C01 138 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 PKP4Q99569 1192 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 FAM167BQ9BTA0 163 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 ACAT2Q9BWD1 397 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 ZBTB20Q9HC78 741 aaPredicted RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 GALPQ9UBC7 116 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 TAC3Q9UHF0 121 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 NOVA2Q9UNW9 492 aaKnown RBP12.65□□□□□ -0.38
APOC1-209ENST00000592885 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
APOC1-209ENST00000592885 MDC1Q14676 2089 aaKnown RBP12.65□□□□□ -0.39
APOC1-209ENST00000592885 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 ANKUB1A6NFN9 424 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 E7ENX8 843 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 GFYI3L273 518 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 MASP2O00187 686 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 SMAPO00193 183 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 PGRMC1O00264 195 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 ZBTB14O43829 449 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 NRP2O60462 931 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 CYC1P08574 325 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 ANXA5P08758 320 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 SKIV2L2P42285 1042 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 FNTAP49354 379 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 AP2B1P63010 937 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 TAP2Q03519 686 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 MFAP5Q13361 173 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 ZNF169Q14929 603 aaPredicted RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 TLR1Q15399 786 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 EIF2S3LQ2VIR3 472 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 ATG9BQ674R7 924 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 CCDC137Q6PK04 289 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 ISLR2Q6UXK2 745 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 SHISA6Q6ZSJ9 500 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 CD200R1Q8TD46 325 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 THOC3Q96J01 351 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 OR2A5Q96R48 311 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 LMF1Q96S06 567 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 TGIF2Q9GZN2 237 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms