RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 VSX2P58304 361 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 DCDP81605 110 aaKnown RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 RELAQ04206 551 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 NCF4Q15080 339 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 UGT8Q16880 541 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 DEFB109BQ30KR1 87 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 KBTBD12Q3ZCT8 623 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 WASHC2DQ5SRD0 308 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 YOD1Q5VVQ6 348 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 PRAMEF13Q5VWM6 474 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 FRMPD2BQ6IN97 320 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 FBXO42Q6P3S6 717 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 SBSNQ6UWP8 590 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 CEP128Q6ZU80 1094 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 CTAGE3PQ8IX95 158 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 CEP112Q8N8E3 955 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 EXD3Q8N9H8 876 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 TTC29Q8NA56 475 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 FBF1Q8TES7 1133 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 MED8Q96G25 268 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 GPR22Q99680 433 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 GPAMQ9HCL2 828 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 STARD5Q9NSY2 213 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 SNX7Q9UNH6 387 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
DDX39A-217ENST00000592391 POLHQ9Y253 713 aa13.9□□□□□ -0.18
DDX39A-217ENST00000592391 LOC105369274A0A096LPK9 316 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 LOC102723532A0A0G2JNH3 316 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 A0A1B0GX78 115 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 CDC14CA4D256 554 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 PRB1P04280 392 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 FAM87AP0C7U9 286 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 EZRP15311 586 aaKnown RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 ALAS2P22557 587 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 HRH2P25021 359 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 POLE2P56282 527 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 NFKB2Q00653 900 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 NAB1Q13506 487 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 NAE1Q13564 534 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 IL10RAQ13651 578 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 COL9A2Q14055 689 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 USP10Q14694 798 aaKnown RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 PPP1R3AQ16821 1122 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 NKAIN1Q4KMZ8 207 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 TTLL10Q6ZVT0 673 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 OR4N4Q8N0Y3 316 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 PPM1NQ8N819 430 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 ANKRD49Q8WVL7 239 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 APOBEC4Q8WW27 367 aaKnown RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 ATL1Q8WXF7 558 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 TSPAN17Q96FV3 270 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 SGPP1Q9BX95 441 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 SEMA4CQ9C0C4 833 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 ATG10Q9H0Y0 220 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 CUTCQ9NTM9 273 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 IFT80Q9P2H3 777 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-217ENST00000592391 IKZF3Q9UKT9 509 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
DDX39A-217ENST00000592391 ATRXP46100 2492 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 SEC16AO15027 2179 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 H0YGG7 62 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 H7BY64 318 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 CDC7O00311 574 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 DSCR3O14972 297 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 C1QL1O75973 258 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 WISP3O95389 354 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 EIF2S1P05198 315 aaKnown RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 SFTPCP11686 197 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 STMN1P16949 149 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 ARF3P61204 181 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 ZXDCQ2QGD7 858 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 MLIPQ5VWP3 458 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 ADCK2Q7Z695 626 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 RELL1Q8IUW5 271 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 OR56A3Q8NH54 315 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 THAP4Q8WY91 577 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 IFT81Q8WYA0 676 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 FBXL8Q96CD0 374 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 PRAP1Q96NZ9 151 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 OR2A5Q96R48 311 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 TMEM184CQ9NVA4 438 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 GEMIN8Q9NWZ8 242 aaKnown RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 GPN3Q9UHW5 284 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-217ENST00000592391 KCNMB2Q9Y691 235 aa13.88□□□□□ -0.19
DDX39A-217ENST00000592391 HYKKA2RU49 373 aa13.87□□□□□ -0.19
DDX39A-217ENST00000592391 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
DDX39A-217ENST00000592391 HAT1O14929 419 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms