RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SDR42E2A6NKP2 422 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 ARHGEF33A8MVX0 844 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 MAP2K7O14733 419 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 CEP104O60308 925 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 USP1O94782 785 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 ENO3P13929 434 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 EZRP15311 586 aaKnown RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 MFAP5Q13361 173 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 DSG2Q14126 1118 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 ZNF169Q14929 603 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 KLHL38Q2WGJ6 581 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 ZNF425Q6IV72 752 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 CENPUQ71F23 418 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 NDUFAF7Q7L592 441 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 MAMDC2Q7Z304 686 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 PRELID2Q8N945 189 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 THOC3Q96J01 351 aaKnown RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 EBNA1BP2Q99848 306 aaKnown RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 RUVBL2Q9Y230 463 aaKnown RBP17.98■□□□□ 0.47
CCDC43-205ENST00000592333 MAU2Q9Y6X3 613 aa17.98■□□□□ 0.47
CCDC43-205ENST00000592333 H0YGG7 62 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 EIF3FO00303 357 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 EIF2S1P05198 315 aaKnown RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CYC1P08574 325 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 MPC1LP0DKB6 136 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 FBLP22087 321 aaKnown RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 HRH2P25021 359 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 SLC26A3P40879 764 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CLCN7P51798 805 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 PNLIPRP1P54315 467 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 ARF3P61204 181 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 FAM53BQ14153 422 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 FASTKQ14296 549 aaKnown RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 ICE2Q659A1 982 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CES3Q6UWW8 571 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 RIPOR1Q6ZS17 1223 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CAND1Q86VP6 1230 aaKnown RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 KCNMB4Q86W47 210 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 PAQR7Q86WK9 346 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 TMEM151BQ8IW70 566 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 KBTBD2Q8IY47 623 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CALML6Q8TD86 181 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 C10orf90Q96M02 699 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 OR2A5Q96R48 311 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 CCDC68Q9H2F9 335 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 MKKSQ9NPJ1 570 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-205ENST00000592333 C3orf18Q9UK00 162 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 POLEQ07864 2286 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 DOCK10Q96BY6 2186 aa17.97■□□□□ 0.47
CCDC43-205ENST00000592333 TCRBV7S3A2A0A539 114 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 GOLGA8KD6RF30 607 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 GOLGA8TH3BQL2 631 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 GFYI3L273 518 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 MASP2O00187 686 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 ZBTB14O43829 449 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 ICAM2P13598 275 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 EDN3P14138 238 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 CXCR2P25025 360 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 GPS1Q13098 491 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 DHX34Q14147 1143 aaKnown RBP17.96■□□□□ 0.47
CCDC43-205ENST00000592333 INAQ16352 499 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 ACSBG2Q5FVE4 666 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 LRRC8EQ6NSJ5 796 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 CASC4Q6P4E1 433 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 REXO1L1PQ8IX06 675 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 PARP9Q8IXQ6 854 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 CSNK1A1LQ8N752 337 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 FAR1Q8WVX9 515 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 ASB11Q8WXH4 323 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 RERGQ96A58 199 aaPredicted RBP17.96■□□□□ 0.47
CCDC43-205ENST00000592333 CABS1Q96KC9 395 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 NAP1L3Q99457 506 aaPredicted RBP17.96■□□□□ 0.47
CCDC43-205ENST00000592333 TRIM56Q9BRZ2 755 aaKnown RBP17.96■□□□□ 0.47
CCDC43-205ENST00000592333 NBPF19A0A087WUL8 3843 aa17.96■□□□□ 0.47
CCDC43-205ENST00000592333 NOTCH2Q04721 2471 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 IGKV1-8A0A0C4DH67 115 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 E7ENX8 843 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 NRDCO43847 1150 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 MED26O95402 600 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 SLC16A8O95907 504 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 KRT14P02533 472 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 SKIV2L2P42285 1042 aaKnown RBP17.95■□□□□ 0.46
CCDC43-205ENST00000592333 TAP2Q03519 686 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 Q0VFX4 171 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 THOC5Q13769 683 aaKnown RBP17.95■□□□□ 0.46
CCDC43-205ENST00000592333 HIF1AQ16665 826 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 ZNF470Q6ECI4 717 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 SHISA6Q6ZSJ9 500 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 LRRC8AQ8IWT6 810 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 RASGEF1CQ8N431 466 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 METTL27Q8N6F8 245 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-205ENST00000592333 ZNF480Q8WV37 535 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 PKP4Q99569 1192 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 ACAT2Q9BWD1 397 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 FAM129AQ9BZQ8 928 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 RIC8BQ9NVN3 520 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 TAC3Q9UHF0 121 aa17.95■□□□□ 0.46
CCDC43-205ENST00000592333 RUVBL1Q9Y265 456 aaKnown RBP17.95■□□□□ 0.46
CCDC43-205ENST00000592333 NTNG1Q9Y2I2 539 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms