RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TBC1D19Q8N5T2 526 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 SLC38A9Q8NBW4 561 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PROKR1Q8TCW9 393 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PDLIM5Q96HC4 596 aaKnown RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CYTH2Q99418 400 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 FMO2Q99518 471 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 RBBP8Q99708 897 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ZFYVE21Q9BQ24 234 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 RHOXF2Q9BQY4 288 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PLCD4Q9BRC7 762 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 HAUS8Q9BT25 410 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 NLNQ9BYT8 704 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ACTL8Q9H568 366 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 AKIRIN1Q9H9L7 192 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CAB39LQ9H9S4 337 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 POPDC3Q9HBV1 291 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 SLC6A20Q9NP91 592 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 SMYD2Q9NRG4 433 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 STARD5Q9NSY2 213 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 DHCR7Q9UBM7 475 aaKnown RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 DMGDHQ9UI17 866 aaKnown RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 POLHQ9Y253 713 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PADI2Q9Y2J8 665 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 IKBKGQ9Y6K9 419 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 OR2A25A4D2G3 310 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 H7BY64 318 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 PHGDHO43175 533 aaKnown RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 HCRTR1O43613 425 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 CTSVO60911 334 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ACSL3O95573 720 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 TSPAN12O95859 305 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 S100BP04271 92 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ITGB2P05107 769 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ANXA5P08758 320 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 RAB40ALP0C0E4 278 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 CCDC166P0CW27 439 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF37AP17032 561 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 F8A1P23610 371 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 RPS18P62269 152 aaKnown RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 TBPL1P62380 186 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 SLC9A5Q14940 896 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 PHKG1Q16816 387 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 YOD1Q5VVQ6 348 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 RHBDD2Q6NTF9 364 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 TMEM207Q6UWW9 146 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 MBOAT1Q6ZNC8 495 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ADAMTSL2Q86TH1 951 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 SYVN1Q86TM6 617 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ENDOVQ8N8Q3 282 aaKnown RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 APOBEC4Q8WW27 367 aaKnown RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 ANKRD7Q92527 254 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 FBXL8Q96CD0 374 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 WBP1Q96G27 269 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 CABS1Q96KC9 395 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 PRAP1Q96NZ9 151 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 GPR22Q99680 433 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 YIPF2Q9BWQ6 316 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 FAM117AQ9C073 453 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 PRM3Q9NNZ6 103 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 CUTCQ9NTM9 273 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 TMEM184CQ9NVA4 438 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 NINJ2Q9NZG7 142 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 TLK1Q9UKI8 766 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 CDC14AQ9UNH5 594 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
BRCA1-227ENST00000591849 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 PCDHGA6Q9Y5G7 932 aa9.65□□□□□ -0.86
BRCA1-227ENST00000591849 SDK2Q58EX2 2172 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 LOC105369274A0A096LPK9 316 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 LOC102723532A0A0G2JNH3 316 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 A0A1B0GX78 115 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 HYKKA2RU49 373 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 NCF1BA6NI72 391 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 NCF1CA8MVU1 366 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 H0YGG7 62 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CDC7O00311 574 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TXNDC9O14530 226 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 DSCR3O14972 297 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 FAM155BO75949 473 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CTSBP07858 339 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 INHBAP08476 426 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 SFTPCP11686 197 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 NCF1P14598 390 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 EZRP15311 586 aaKnown RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CRABP2P29373 138 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 RORAP35398 523 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 FOLR3P41439 243 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 RAB10P61026 200 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 ARF3P61204 181 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 ATP6V0D1P61421 351 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 YBX1P67809 324 aaKnown RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 LY6DQ14210 128 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CSHL1Q14406 222 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TSNQ15631 228 aaKnown RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 NDUFA9Q16795 377 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 MUM1Q2TAK8 710 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 NKAIN1Q4KMZ8 207 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 ATP1A1-AS1Q5TC04 95 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms