RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 HSD17B2P37059 387 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 VPS41P49754 854 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 YBX1P67809 324 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CDC16Q13042 620 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 GPS1Q13098 491 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 ARHGAP19Q14CB8 494 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 KLHL38Q2WGJ6 581 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 TTLL9Q3SXZ7 439 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 SUSD1Q6UWL2 747 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CILP2Q8IUL8 1156 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CNDP1Q96KN2 507 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 BARD1Q99728 777 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 YIPF2Q9BWQ6 316 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 INTS10Q9NVR2 710 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 STOX2Q9P2F5 926 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 GALPQ9UBC7 116 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CSAG2Q9Y5P2 127 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CELSR2Q9HCU4 2923 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 MAGEB16A2A368 324 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 MYO1CO00159 1063 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PRPF4O43172 522 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PSIP1O75475 530 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 CCNDBP1O95273 360 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 LDLRP01130 860 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 ERGP11308 486 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PNLIPRP1P54315 467 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 EMP3P54852 163 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 DHX34Q14147 1143 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 TLR1Q15399 786 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 KCTD19Q17RG1 926 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PRTGQ2VWP7 1150 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 ISLR2Q6UXK2 745 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 CENPUQ71F23 418 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 MAMDC2Q7Z304 686 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PRELID2Q8N945 189 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 RERGQ96A58 199 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 C10orf90Q96M02 699 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 PLCD4Q9BRC7 762 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 CCDC68Q9H2F9 335 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF160Q9HCG1 818 aa17.1■□□□□ 0.33
PRKCSH-211ENST00000590098 CACNA1DQ01668 2161 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 DIDO1Q9BTC0 2240 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 WIPF3A6NGB9 483 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 USP1O94782 785 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 KRT14P02533 472 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 CXCR2P25025 360 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 TSFMP43897 325 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 EMP2P54851 167 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 Q0VFX4 171 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 THOC5Q13769 683 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 KCNJ11Q14654 390 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 VWA2Q5GFL6 755 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 B3GNTL1Q67FW5 361 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 LINC00696Q6ZRV3 163 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 KCNMB4Q86W47 210 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 PAQR7Q86WK9 346 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 KBTBD2Q8IY47 623 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 CSNK1A1LQ8N752 337 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 ST6GALNAC3Q8NDV1 305 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 C8orf44Q96CB5 159 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 MVB12AQ96EY5 273 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 LMF1Q96S06 567 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 PKP4Q99569 1192 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 TRPC4Q9UBN4 977 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 ZGRF1Q86YA3 2104 aa17.09■□□□□ 0.33
PRKCSH-211ENST00000590098 IGLV3-12A0A075B6K2 115 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 NSG1A0A0A6YYJ2 146 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 SDR42E2A6NKP2 422 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 SYF2O95926 243 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 ANXA5P08758 320 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 MLNP12872 115 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 COL8A1P27658 744 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 MAGEA6P43360 314 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 CLCN7P51798 805 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 PRDX1Q06830 199 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 MFAP5Q13361 173 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 DSG2Q14126 1118 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 ICE2Q659A1 982 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 ATG9BQ674R7 924 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 NEK10Q6ZWH5 1172 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 NDUFAF7Q7L592 441 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 LAPTM4BQ86VI4 370 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 CAND1Q86VP6 1230 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 REXO1L1PQ8IX06 675 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 GRHL3Q8TE85 626 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 ZNF669Q96BR6 464 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 MMABQ96EY8 250 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 MESP1Q9BRJ9 268 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 ABCF3Q9NUQ8 709 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 KLHL42Q9P2K6 505 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 TAC3Q9UHF0 121 aa17.08■□□□□ 0.32
PRKCSH-211ENST00000590098 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms