RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 UBE2R2Q712K3 238 aaPredicted RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 STRA8Q7Z7C7 330 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 SLC26A11Q86WA9 606 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 FAM20CQ8IXL6 584 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 MYO1HQ8N1T3 1032 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 TMEM102Q8N9M5 508 aaPredicted RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 LMNTD1Q8N9Z9 388 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 FLVCR1-AS1Q8TAF5 88 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 HMGCLL1Q8TB92 370 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 FAM45AQ8TCE6 357 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 ASB11Q8WXH4 323 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 CDKL2Q92772 493 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 UBL7Q96S82 380 aaPredicted RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 FMO2Q99518 471 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 SLC7A5P2Q9GIP4 190 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 TWSG1Q9GZX9 223 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 IRAK4Q9NWZ3 460 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 MOCS1Q9NZB8 636 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 PADI1Q9ULC6 663 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 VWA7Q9Y334 891 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PCM1Q15154 2024 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 LOC101059948A0A1B0GTJ6 334 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ZNF891A8MT65 544 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 E7EQ34 232 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 GFYI3L273 518 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 MYO1CO00159 1063 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ERLIN1O75477 346 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 OR2B3O76000 313 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 KLK3P07288 261 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 C8GP07360 202 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 GSTA2P09210 222 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 MAGP20916 626 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 SAT1P21673 171 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 SSTR1P30872 391 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 RPA3P35244 121 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 DLSTP36957 453 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 IL2P60568 153 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ILF2Q12905 390 aaKnown RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 ARHGAP19Q14CB8 494 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ZIC1Q15915 447 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 CYP2A13Q16696 494 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 DEFB110Q30KQ9 67 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 RNFT1Q5M7Z0 435 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 EMBQ6PCB8 327 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PAQR3Q6TCH7 311 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 C3orf62Q6ZUJ4 267 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PIWIL4Q7Z3Z4 852 aaKnown RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 GSPT2Q8IYD1 628 aaKnown RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 FBXO15Q8NCQ5 510 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 OR1L3Q8NH93 324 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 DENND1AQ8TEH3 1009 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 AENQ8WTP8 325 aaKnown RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 EEF1AKMT1Q8WVE0 214 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 SMPDL3AQ92484 453 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 CLIP3Q96DZ5 547 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PKP4Q99569 1192 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 CHRNA10Q9GZZ6 450 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ACTR5Q9H9F9 607 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 FAM60AQ9NP50 221 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 LHX9Q9NQ69 397 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ARGLU1Q9NWB6 273 aaPredicted RBP9.97□□□□□ -0.81
SDF2-208ENST00000589788 TXNDC16Q9P2K2 825 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 CROTQ9UKG9 612 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PLCL2Q9UPR0 1127 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 KLHL20Q9Y2M5 609 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 PSAT1Q9Y617 370 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ZFYVE26Q68DK2 2539 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 SPTBP11277 2137 aa9.97□□□□□ -0.81
SDF2-208ENST00000589788 ITPR1Q14643 2758 aa9.96□□□□□ -0.81
SDF2-208ENST00000589788 KATNA1O75449 491 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 SLC16A8O95907 504 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 HBQ1P09105 142 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 WT1P19544 449 aaPredicted RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 TCN2P20062 427 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 FDXRP22570 491 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 PSMB5P28074 263 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 CMPK1P30085 196 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 MAGEA4P43358 317 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 PNLIPRP1P54315 467 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 TIAL1Q01085 375 aaKnown RBP eCLIP9.96□□□□□ -0.82
SDF2-208ENST00000589788 MC1RQ01726 317 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 SP140Q13342 867 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 FASTKQ14296 549 aaKnown RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 NAA25Q14CX7 972 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 TAF1BQ53T94 588 aaPredicted RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 ZC3H12BQ5HYM0 836 aaKnown RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 THEMIS2Q5TEJ8 643 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 FIGLAQ6QHK4 219 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 CYHR1Q6ZMK1 362 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 ZC3HC1Q86WB0 502 aaKnown RBP9.96□□□□□ -0.82
SDF2-208ENST00000589788 RELL1Q8IUW5 271 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 SYTL1Q8IYJ3 562 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 DNAJC22Q8N4W6 341 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms