RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PCM1Q15154 2024 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 LOC105369274A0A096LPK9 316 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 LOC102723532A0A0G2JNH3 316 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 TCP11X1B4DZS4 312 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 SOCS6O14544 535 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 PRPF4O43172 522 aaKnown RBP eCLIP13.71□□□□□ -0.215e-14■■■■□ 26.3
MBD1-220ENST00000589758 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 MPC1LP0DKB6 136 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 OR1D4P47884 311 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 CLCN7P51798 805 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 PRDX1Q06830 199 aaKnown RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 RBBP7Q16576 425 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 FBXO42Q6P3S6 717 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 KIRREL2Q6UWL6 708 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 Q6ZS92 163 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 OR4N4Q8N0Y3 316 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 FBXO15Q8NCQ5 510 aaPredicted RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 KCNJ9Q92806 393 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 MVB12AQ96EY5 273 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 SOX17Q9H6I2 414 aaPredicted RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 CTSFQ9UBX1 484 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 ZNF282Q9UDV7 671 aaPredicted RBP13.71□□□□□ -0.21
MBD1-220ENST00000589758 MAU2Q9Y6X3 613 aa13.71□□□□□ -0.21
MBD1-220ENST00000589758 RELNP78509 3460 aa13.71□□□□□ -0.22
MBD1-220ENST00000589758 HECTD1Q9ULT8 2610 aa13.71□□□□□ -0.22
MBD1-220ENST00000589758 SPENQ96T58 3664 aaKnown RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 TXNDC9O14530 226 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 ZBTB14O43829 449 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 RELAQ04206 551 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 CTBP1Q13363 440 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 TSTA3Q13630 321 aaPredicted RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 LONRF1Q17RB8 773 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 ICE2Q659A1 982 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 SUSD1Q6UWL2 747 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 PCGF5Q86SE9 256 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 TMEM151BQ8IW70 566 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 METTL27Q8N6F8 245 aaPredicted RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 STT3BQ8TCJ2 826 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 SSC4DQ8WTU2 575 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 INPP5DQ92835 1189 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 SNRNP40Q96DI7 357 aaKnown RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 AGAP4Q96P64 663 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 PKP4Q99569 1192 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
MBD1-220ENST00000589758 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 SHANK1Q9Y566 2161 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
MBD1-220ENST00000589758 IGLV3-12A0A075B6K2 115 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 ZCWPW2A0A1B0GU75 182 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 EFCAB8A8MWE9 144 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 H0YGG7 62 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 MASP2O00187 686 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 RAD51CO43502 376 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 BANF1O75531 89 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 ZGLP1P0C6A0 271 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 FBLP22087 321 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 IVDP26440 423 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 MAGEA3P43357 314 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 ITGA8P53708 1063 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 ARF3P61204 181 aaPredicted RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 YBX1P67809 324 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 ABATP80404 500 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 CKAP4Q07065 602 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 GARNL3Q5VVW2 1013 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 IGFL2Q6UWQ7 119 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 SHISA6Q6ZSJ9 500 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 DENND6AQ8IWF6 608 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 GABPB2Q8TAK5 448 aaPredicted RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 PPP4R1Q8TF05 950 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 RERGQ96A58 199 aaPredicted RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 SNF8Q96H20 258 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 CABS1Q96KC9 395 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 PWWP2AQ96N64 755 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 EBNA1BP2Q99848 306 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 LHPPQ9H008 270 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 DPH5Q9H2P9 285 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 FBXO6Q9NRD1 293 aaPredicted RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 C20orf96Q9NUD7 363 aaPredicted RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 TAC3Q9UHF0 121 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 SNX24Q9Y343 169 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 DHRS7Q9Y394 339 aa13.69□□□□□ -0.22
MBD1-220ENST00000589758 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
MBD1-220ENST00000589758 E7ENX8 843 aa13.68□□□□□ -0.22
MBD1-220ENST00000589758 GFYI3L273 518 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms